Factsheet for VIT_08s0040g00770.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
vacuole 1
cytosol 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra016965.1-P	Field mustard	cytosol	30.24	66.67
CDY14748	Canola	cytosol	29.27	64.52
VIT_13s0084g00050.t01	Wine grape	cytosol	62.93	64.18
GSMUA_Achr11P...	Banana	cytosol	31.71	63.73
Bra000210.1-P	Field mustard	cytosol, mitochondrion, plastid	28.29	61.7
VIT_06s0009g02230.t01	Wine grape	cytosol	29.76	60.4
CDY22487	Canola	mitochondrion	27.32	60.22
CDY35433	Canola	cytosol	27.32	59.57
Bra005839.1-P	Field mustard	extracellular	58.05	51.97
CDX80942	Canola	extracellular	56.59	50.88
CDY52136	Canola	extracellular	56.59	50.66
AT2G40880.1	Thale cress	extracellular	30.24	49.6
AT5G05110.1	Thale cress	extracellular	55.61	49.14
CDY06956	Canola	extracellular	30.24	47.69
CDY14750	Canola	extracellular	29.27	46.51

Protein Annotations

EntrezGene:100258481	wikigene:100258481	Gene3D:3.10.450.10	Gene3D:3.10.450.650	MapMan:35.1	ProteinID:CCB57134
ProteinID:CCB57134.1	ncoils:Coil	InterPro:Cystatin	InterPro:Cystatin_dom	UniProt:F6HQQ3	EMBL:FN596008
GO:GO:0002020	GO:GO:0003674	GO:GO:0004869	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0010466	GO:GO:0019538	GO:GO:0030234	GO:GO:0030414
GO:GO:2000117	EntrezGene:LOC100258481	wikigene:LOC100258481	PFAM:PD001231	PFAM:PF16845	ScanProsite:PS00287
PANTHER:PTHR11413	PANTHER:PTHR11413:SF56	InterPro:Prot_inh_cystat_CS	SMART:SM00043	SUPFAM:SSF54403	TIGR:TC61389
UniParc:UPI000210967F	ArrayExpress:VIT_08s0040g00770	EnsemblPlantsGene:VIT_08s0040g00770	EnsemblPlants:VIT_08s0040g00770.t01	unigene:Vvi.8106	RefSeq:XP_002283400
RefSeq:XP_002283400.1	:	:	:	:	:

Description

Cysteine proteinase inhibitor [Source:UniProtKB/TrEMBL;Acc:F6HQQ3]

Coordinates

chr8:+:11729122..11732849

Molecular Weight (calculated)

23251.0 Da

IEP (calculated)

9.318

GRAVY (calculated)

-0.453

Length

205 amino acids

Sequence
(BLAST)

001: MPKTMNLLGG VRDCGGIQNS AEIESIARFA VQEHNKNQNA LLEFAKVLKA KEQVVAGKIY YLTLEAIDAG KKKIYEAKVW VKPWMNFKEL QEFKHSQETK
101: SFAPSDLGVK QDGHGSEWQV VPTNDPEVQD AANHVVKSIQ MRSNSIFRYE LLEILLAKAK VIEGSAKFDL LLKLKWGSKD VKFKAEVNKN IEGKFCSTQW
201: KEDHL

Best Arabidopsis Sequence Match ( AT3G12490.2 )
(BLAST)

001: MMRSRFLLFI VFFSLSLFIS SLIASDLGFC NEEMALVGGV GDVPANQNSG EVESLARFAV DEHNKKENAL LEFARVVKAK EQVVAGTLHH LTLEILEAGQ
101: KKLYEAKVWV KPWLNFKELQ EFKPASDAPA ITSSDLGCKQ GEHESGWREV PGDDPEVKHV AEQAVKTIQQ RSNSLFPYEL LEVVHAKAEV TGEAAKYNML
201: LKLKRGEKEE KFKVEVHKNH EGALHLNHAE QHHD

Arabidopsis Description

CYS6Cysteine proteinase inhibitor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0X6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.