Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 8
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005839.1-P | Field mustard | extracellular | 70.26 | 71.18 |
| CDX80942 | Canola | extracellular | 69.4 | 70.61 |
| CDY52136 | Canola | extracellular | 68.53 | 69.43 |
| VIT_08s0040g00770.t01 | Wine grape | cytosol | 49.14 | 55.61 |
| GSMUA_Achr11P... | Banana | cytosol | 20.69 | 47.06 |
| AT3G12490.2 | Thale cress | extracellular | 43.53 | 43.16 |
| AT2G40880.1 | Thale cress | extracellular | 22.41 | 41.6 |
| AT5G12140.1 | Thale cress | cytosol | 17.24 | 39.6 |
Protein Annotations
| Gene3D:3.10.450.10 | Gene3D:3.10.450.650 | MapMan:35.1 | EntrezGene:830393 | ProteinID:AED90829.1 | EMBL:AF370168 |
| ArrayExpress:AT5G05110 | EnsemblPlantsGene:AT5G05110 | RefSeq:AT5G05110 | TAIR:AT5G05110 | RefSeq:AT5G05110-TAIR-G | EnsemblPlants:AT5G05110.1 |
| TAIR:AT5G05110.1 | EMBL:AY059130 | EMBL:AY086750 | Unigene:At.19811 | ProteinID:BAB11533.1 | InterPro:Cystatin |
| InterPro:Cystatin_dom | GO:GO:0002020 | GO:GO:0003674 | GO:GO:0004869 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0010466 | GO:GO:0010951 | GO:GO:0019538 | GO:GO:0030234 | GO:GO:0030414 |
| GO:GO:2000117 | MEROPS:I25.958 | RefSeq:NP_196130.1 | PFAM:PD001231 | PFAM:PF00031 | PFAM:PF16845 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00287 | PANTHER:PTHR11413 | PANTHER:PTHR11413:SF56 |
| InterPro:Prot_inh_cystat_CS | UniProt:Q8LC76 | SMART:SM00043 | SUPFAM:SSF54403 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI00000A4BF8 | : | : | : | : | : |
Description
CYS7Cysteine proteinase inhibitor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8LC76]
Coordinates
chr5:-:1507418..1508927
Molecular Weight (calculated)
26583.4 Da
IEP (calculated)
8.772
GRAVY (calculated)
-0.282
Length
232 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMRRASMCM MLICVSLVLL SGFGQFVICS EEKGTYNDNV VKMKLGGFSD SKNDWNGGKE IDDIALFAVQ EHNRRENAVL ELARVLKATE QVVAGKLYRL
101: TLEVIEAGEK KIYEAKVWVK PWMNFKQLQE FKNIIPSFTI SDLGFKPDGN GFDWRSVSTN NPEVQEAAKH AMKSLQQKSN SLFPYKLIDI ILARAKVVEE
201: RVKFELLLKL ERGNKLEKFM VEVMKDQTGK YE
101: TLEVIEAGEK KIYEAKVWVK PWMNFKQLQE FKNIIPSFTI SDLGFKPDGN GFDWRSVSTN NPEVQEAAKH AMKSLQQKSN SLFPYKLIDI ILARAKVVEE
201: RVKFELLLKL ERGNKLEKFM VEVMKDQTGK YE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.