CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005839.1-P	Field mustard	extracellular	95.18	94.76
CDY52136	Canola	extracellular	94.3	93.89
AT5G05110.1	Thale cress	extracellular	70.61	69.4
CDY14748	Canola	cytosol	24.12	59.14
VIT_08s0040g00770.t01	Wine grape	cytosol	50.88	56.59
CDY35433	Canola	cytosol	23.25	56.38
CDY22487	Canola	mitochondrion	21.93	53.76
CDY42150	Canola	cytosol	46.49	52.22
CDY50343	Canola	cytosol	45.61	50.73
CDY08429	Canola	extracellular	47.37	47.16
GSMUA_Achr11P...	Banana	cytosol	20.61	46.08
CDY06956	Canola	extracellular	25.88	45.38
CDY08430	Canola	extracellular	45.18	44.02
CDY14750	Canola	extracellular	24.56	43.41
CDX91170	Canola	cytosol	17.98	40.59
CDX85699	Canola	cytosol	17.98	40.59
CDY03938	Canola	extracellular	36.84	40.0
CDX97171	Canola	cytosol	17.54	39.6
CDX69704	Canola	cytosol	17.54	39.6
CDY50523	Canola	cytosol	25.0	38.0

Protein Annotations

Gene3D:3.10.450.10	Gene3D:3.10.450.650	MapMan:35.1	GO:A0A078CW11	EnsemblPlants:CDX80942	ProteinID:CDX80942
ProteinID:CDX80942.1	InterPro:Cystatin	InterPro:Cystatin_dom	GO:GO:0003674	GO:GO:0004869	GO:GO:0030234
EnsemblPlantsGene:GSBRNA2T00134356001	PFAM:PD001231	PFAM:PF16845	ScanProsite:PS00287	PANTHER:PTHR11413	PANTHER:PTHR11413:SF56
InterPro:Prot_inh_cystat_CS	SMART:SM00043	SUPFAM:SSF54403	SignalP:SignalP-noTM	UniParc:UPI0004EDFC6A	SEG:seg

Description

BnaC03g01960D

Coordinates

chrLK031823:-:933495..934846

Molecular Weight (calculated)

25829.5 Da

IEP (calculated)

9.687

GRAVY (calculated)

-0.282

Length

228 amino acids

Sequence
(BLAST)

001: MDTRLSPVLI CVSLVLLSGL GQLVICRQEK ETYNDVVRMK LGGFRDSTNN RNGGGEIDDI ALFAVQEHNK RENGVVELVR VLKATEQVVA GKLYSLTLEV
101: KEAGEKKIYE AKVWVKPWMN FKQLQEFKSV VPSFTVSDLG LKSDGNGFEW RSVSTKDPEV QEAAKHAVKS IQQRSNSLFP YKLIDIILAR AKVVEDRVKF
201: ELLLKLEKGN KAEKLMVEVM KYQNGKFH

Best Arabidopsis Sequence Match ( AT5G05110.1 )
(BLAST)

001: MDMRRASMCM MLICVSLVLL SGFGQFVICS EEKGTYNDNV VKMKLGGFSD SKNDWNGGKE IDDIALFAVQ EHNRRENAVL ELARVLKATE QVVAGKLYRL
101: TLEVIEAGEK KIYEAKVWVK PWMNFKQLQE FKNIIPSFTI SDLGFKPDGN GFDWRSVSTN NPEVQEAAKH AMKSLQQKSN SLFPYKLIDI ILARAKVVEE
201: RVKFELLLKL ERGNKLEKFM VEVMKDQTGK YE

Arabidopsis Description

CYS7Cysteine proteinase inhibitor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8LC76]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.