Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G502100.1 | Wheat | cytosol | 64.88 | 92.37 |
| TraesCS5A01G487700.1 | Wheat | extracellular | 39.29 | 46.48 |
| Os01t0803200-01 | Rice | extracellular | 37.5 | 45.0 |
| Bra008912.1-P | Field mustard | cytosol | 25.0 | 41.58 |
| CDX97171 | Canola | cytosol | 25.0 | 41.58 |
| Bra023365.1-P | Field mustard | cytosol | 24.4 | 40.59 |
| CDX69704 | Canola | cytosol | 24.4 | 40.59 |
| CDX85699 | Canola | cytosol | 24.4 | 40.59 |
| CDX91170 | Canola | cytosol | 24.4 | 40.59 |
| TraesCS3A01G331500.1 | Wheat | extracellular | 33.93 | 40.14 |
| AT5G12140.1 | Thale cress | cytosol | 23.21 | 38.61 |
| TraesCS1A01G256400.1 | Wheat | extracellular | 23.21 | 21.55 |
| TraesCS3A01G185800.1 | Wheat | extracellular | 29.76 | 20.58 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G487600.1 | EnsemblPlantsGene:TraesCS5A01G487600 | Gene3D:3.10.450.650 | GO:GO:0003674 | GO:GO:0004869 | GO:GO:0030234 |
| InterPro:Cystatin | InterPro:Cystatin_dom | PANTHER:PTHR11413 | PANTHER:PTHR11413:SF45 | PFAM:PD001231 | PFAM:PF16845 |
| SEG:seg | SignalP:SignalP-noTM | SMART:SM00043 | SUPFAM:SSF54403 | TIGR:cd00042 | MapMan:35.1 |
Description
No Description!
Coordinates
chr5A:+:657725197..657725910
Molecular Weight (calculated)
19186.3 Da
IEP (calculated)
6.536
GRAVY (calculated)
-0.283
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMWRHRVLG SVATLLLLLT LVQPFTLNQI AEDAPPTLGG IQDSPGPEKV YGGIEDWPGA ENDLRVVDLA RFAVSEHNSN TNAVLEFRKV VKVKRQVVEG
101: MMYYITIEVD EGWAKKLYEA KVWDRPWLDS NPRKLSEFKP AEDKLCTLLR NMPAFLPRLN RAGCIEYK
101: MMYYITIEVD EGWAKKLYEA KVWDRPWLDS NPRKLSEFKP AEDKLCTLLR NMPAFLPRLN RAGCIEYK
001: MALVGGVGDV PANQNSGEVE SLARFAVDEH NKKENALLEF ARVVKAKEQV VAGTLHHLTL EILEAGQKKL YEAKVWVKPW LNFKELQEFK PASDAPAITS
101: SDLGCKQGEH ESGWREVPGD DPEVKHVAEQ AVKTIQQRSN SLFPYELLEV VHAKAECQ
101: SDLGCKQGEH ESGWREVPGD DPEVKHVAEQ AVKTIQQRSN SLFPYELLEV VHAKAECQ
Arabidopsis Description
CYS6Cysteine proteinase inhibitor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0X6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.