CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002236.1-P	Field mustard	cytosol	99.09	99.09
CDY14000	Canola	cytosol	96.36	97.55
AT5G19440.1	Thale cress	plastid	88.48	89.57
CDY65726	Canola	cytosol	74.24	75.38
CDY03618	Canola	cytosol	74.24	75.38
CDY43911	Canola	cytosol	73.94	75.08
CDY22576	Canola	cytosol	73.33	74.46
CDY68009	Canola	cytosol, endoplasmic reticulum, golgi	57.88	59.32
CDX94966	Canola	golgi, mitochondrion, peroxisome, plastid	55.76	57.14
CDY72415	Canola	cytosol, endoplasmic reticulum, peroxisome	56.06	56.92
CDY45844	Canola	cytosol, golgi, peroxisome	56.06	56.92
CDY64747	Canola	extracellular, golgi, mitochondrion, plastid	55.76	56.79
CDX94965	Canola	golgi	55.15	56.0
CDX94967	Canola	plasma membrane	52.12	53.42
CDX94968	Canola	endoplasmic reticulum, golgi, plastid	52.42	53.07
CDY35052	Canola	cytosol	44.24	52.9
CDY64748	Canola	cytosol	55.15	48.66
CDX81743	Canola	cytosol	49.7	48.24
CDY63972	Canola	cytosol	48.18	48.04
CDY57397	Canola	cytosol, endoplasmic reticulum, peroxisome	46.97	47.99
CDY33365	Canola	cytosol	49.7	47.81
CDY52857	Canola	cytosol	49.7	47.81
CDY64860	Canola	cytosol	47.88	47.73
CDY32979	Canola	cytosol, endoplasmic reticulum, peroxisome	46.67	47.68
CDX87345	Canola	cytosol	47.58	47.29
CDY39941	Canola	cytosol	47.58	47.29
CDY24810	Canola	cytosol	44.85	46.69
CDX75502	Canola	cytosol, extracellular, plastid	44.85	46.4
CDY41656	Canola	cytosol, plastid, vacuole	44.55	46.37
CDX69139	Canola	cytosol, extracellular, plastid	44.24	45.77
CDY38590	Canola	cytosol	40.91	42.06
CDX69634	Canola	cytosol	40.91	42.06
CDX96012	Canola	cytosol, nucleus, peroxisome	39.7	40.81
CDY09372	Canola	cytosol	39.09	40.19
CDY15830	Canola	cytosol	38.79	39.88
CDX84989	Canola	cytosol	37.88	38.94
CDY42105	Canola	cytosol, plastid	37.27	38.32
CDX84988	Canola	cytosol	33.94	36.72
CDY42108	Canola	cytosol	22.73	31.91

Protein Annotations

EnsemblPlants:CDX92530	EnsemblPlantsGene:GSBRNA2T00154312001	Gene3D:3.40.50.720	GO:A0A078DT77	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF407
PFAM:PF01370	ProteinID:CDX92530	ProteinID:CDX92530.1	SUPFAM:SSF51735	UniParc:UPI0004EE87FE	MapMan:35.1

Description

BnaA10g15690D

Coordinates

chrLK031872:-:1083300..1085228

Molecular Weight (calculated)

36133.2 Da

IEP (calculated)

6.625

GRAVY (calculated)

-0.089

Length

330 amino acids

Sequence
(BLAST)

001: MANSGEGKVV CVTGASGYIA SWLVKFLLSR GYTVKASVRD PSDPKKTQHL VSLDGAKERL HLFKADLLEE GSFDSAIDGC EGVFHTASPF YHDVKDPQAE
101: LIDPAVKGTL NVLNSCTKAS SVKRVVVTSS MAAVAYNGKP RTPDVTVDET WFSDPEVCKT SKMWYVLSKT LAEDAAWKFA KEKGLDIVTI NPAMVIGPLL
201: QPTLNTSAAA ILNFINGAKT FSNSTFGWVN VKDVANAHIQ AYEIPSANGR YCMVERVLHH SEIVNILRQL YPNLQLPESC ADENPFVPTY EVSKEKIKSI
301: GIDYIPLEVS IKETVESLKE KGFINVRASI

Best Arabidopsis Sequence Match ( AT5G19440.1 )
(BLAST)

001: MANSGEGKVV CVTGASGYIA SWLVKFLLSR GYTVKASVRD PSDPKKTQHL VSLEGAKERL HLFKADLLEQ GSFDSAIDGC HGVFHTASPF FNDAKDPQAE
101: LIDPAVKGTL NVLNSCAKAS SVKRVVVTSS MAAVGYNGKP RTPDVTVDET WFSDPELCEA SKMWYVLSKT LAEDAAWKLA KEKGLDIVTI NPAMVIGPLL
201: QPTLNTSAAA ILNLINGAKT FPNLSFGWVN VKDVANAHIQ AFEVPSANGR YCLVERVVHH SEIVNILREL YPNLPLPERC VDENPYVPTY QVSKDKTRSL
301: GIDYIPLKVS IKETVESLKE KGFAQF

Arabidopsis Description

At5g19440 [Source:UniProtKB/TrEMBL;Acc:Q29Q34]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.