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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, cytosol, peroxisome

Predictor Summary:
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 2
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, endoplasmic reticulum, peroxisome
Any Predictor:cytosol, endoplasmic reticulum, peroxisome
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:endoplasmic reticulum
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra002645.1-P Field mustard cytosol, endoplasmic reticulum, peroxisome 98.14 98.14
CDY57397 Canola cytosol, endoplasmic reticulum, peroxisome 97.21 97.21
AT5G58490.1 Thale cress cytosol 90.4 90.12
KRH72740 Soybean cytosol 78.64 79.38
VIT_06s0004g07130.t01 Wine grape cytosol 78.95 77.51
GSMUA_Achr4P18740_001 Banana cytosol, extracellular, plastid 73.37 74.29
Solyc11g072510.1.1 Tomato cytosol, extracellular 73.68 73.46
PGSC0003DMT400065273 Potato cytosol 73.68 73.46
KRH17091 Soybean cytosol, golgi, plastid 77.71 69.72
Os03t0818200-01 Rice cytosol 69.97 67.66
TraesCS5D01G486300.2 Wheat cytosol 65.94 64.55
TraesCS5B01G486500.1 Wheat cytosol 65.33 63.94
KXG37270 Sorghum cytosol 64.71 63.72
TraesCS5A01G473600.1 Wheat cytosol 64.71 63.33
Zm00001d012980_P001 Maize cytosol 63.78 62.24
EER93204 Sorghum cytosol 62.85 61.52
HORVU5Hr1G112340.7 Barley cytosol, plastid 65.33 56.27
Zm00001d012982_P001 Maize cytosol 63.78 55.23
CDY09372 Canola cytosol 49.54 49.84
CDY15830 Canola cytosol 48.61 48.91
CDY14000 Canola cytosol 47.99 47.55
CDY35052 Canola cytosol 40.56 47.46
CDY22576 Canola cytosol 47.68 47.38
CDY03618 Canola cytosol 47.68 47.38
CDY65726 Canola cytosol 47.68 47.38
CDY43911 Canola cytosol 47.06 46.77
CDX92530 Canola cytosol 47.68 46.67
CDY52857 Canola cytosol 46.44 43.73
CDX81743 Canola cytosol 45.82 43.53
CDY33365 Canola cytosol 45.82 43.15
CDY63972 Canola cytosol 43.03 41.99
CDX94967 Canola plasma membrane 41.8 41.93
CDY64860 Canola cytosol 42.72 41.69
CDX87345 Canola cytosol 42.72 41.57
CDY39941 Canola cytosol 42.72 41.57
CDY68009 Canola cytosol, endoplasmic reticulum, golgi 41.18 41.3
CDY64747 Canola extracellular, golgi, mitochondrion, plastid 40.87 40.74
CDX94965 Canola golgi 40.87 40.62
CDX94966 Canola golgi, mitochondrion, peroxisome, plastid 39.94 40.06
CDY24810 Canola cytosol 39.01 39.75
CDY41656 Canola cytosol, plastid, vacuole 39.01 39.75
CDX75502 Canola cytosol, extracellular, plastid 39.01 39.5
CDY72415 Canola cytosol, endoplasmic reticulum, peroxisome 39.63 39.38
CDX69139 Canola cytosol, extracellular, plastid 38.7 39.19
CDY45844 Canola cytosol, golgi, peroxisome 39.32 39.08
CDX94968 Canola endoplasmic reticulum, golgi, plastid 39.32 38.96
Zm00001d012981_P002 Maize cytosol 51.7 37.7
CDX96012 Canola cytosol, nucleus, peroxisome 36.84 37.07
CDY38590 Canola cytosol 36.84 37.07
CDX69634 Canola cytosol 36.84 37.07
CDY64748 Canola cytosol 40.25 34.76
CDX84989 Canola cytosol 33.13 33.33
CDY42105 Canola cytosol, plastid 33.13 33.33
CDX84988 Canola cytosol 30.65 32.46
CDY42108 Canola cytosol 21.67 29.79
Protein Annotations
EnsemblPlants:CDY32979EnsemblPlantsGene:GSBRNA2T00053196001Gene3D:3.40.50.720GO:A0A078H649GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0050662InterPro:Epimerase_deHydtaseInterPro:NAD(P)-bd_dom_sfPANTHER:PTHR10366PANTHER:PTHR10366:SF369
PFAM:PF01370ProteinID:CDY32979ProteinID:CDY32979.1SEG:segSUPFAM:SSF51735UniParc:UPI0004EE104A
UniProt:A0A078H649MapMan:35.1::::
Description
BnaA10g11850DBnaA10g11850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H649]
Coordinates
chrLK032304:-:34574..36219
Molecular Weight (calculated)
35321.6 Da
IEP (calculated)
5.421
GRAVY (calculated)
-0.019
Length
323 amino acids
Sequence
(BLAST)
001: MSTEREVVCA TGASGCIGSW LVHLLLLRGY SVHATVKNLQ DEKETKHLEA LEGAATRLHL FEMDLLKYDT VSAAVNGCAG VFHLASPCIV DEVQDPEKQL
101: LDPAVKGTLN VLTAAKEAGV KRVVVTSSIS AITPSPNWPA DKIKDEECWA DEDYCKQNGL WYPLSKTLAE KAAWEFAEEK GLDVVVVNPG TVMGPVIPPS
201: INASMLMLQR LLEGCTETYE NFFMGSVHFK DVALAHILVY ENPSAKGRHL CVEAISHYGD FVAKVAELYP NYSVPKLPRE TQPGLLRAKN AAKKLMELGL
301: EFSSMEVIIK DGVESLKSKG FIS
Best Arabidopsis Sequence Match ( AT5G58490.1 )
(BLAST)
001: MLTDEREVVC VTGASGCIGS WLVHQLLLRG YSVHATVKNL QDEKETKHLE GLEGAATRLH LFEMDLLQYD TVSAAINGCS GVFHLASPCI VDEVQDPQKQ
101: LLDPAVKGTI NVLTAAKEAS VKRVVVTSSI SAITPSPNWP ADKIKNEECW AAEDYCRQNG LWYPLSKTLA EKAAWEFAEE KGLDVVVVNP GTVMGPVIPP
201: SLNASMHMLL RLLQGCTETY ENFFMGSVHF KDVALAHILV YEDPYSKGRH LCVEAISHYG DFVAKVAELY PNYNVPKLPR ETQPGLLRDK NASKKLIDLG
301: LKFISMEEII KEGVESLKSK GFIS
Arabidopsis Description
Cinnamoyl-CoA reductase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FGH3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.