Factsheet for Solyc11g072510.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 29876421

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400065273	Potato	cytosol	97.84	97.84
VIT_06s0004g07130.t01	Wine grape	cytosol	79.63	78.42
Bra002645.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	74.38	74.61
KRH72740	Soybean	cytosol	73.46	74.38
CDY32979	Canola	cytosol, endoplasmic reticulum, peroxisome	73.46	73.68
AT5G58490.1	Thale cress	cytosol	73.15	73.15
CDY57397	Canola	cytosol, endoplasmic reticulum, peroxisome	72.53	72.76
GSMUA_Achr4P18740_001	Banana	cytosol, extracellular, plastid	70.06	71.16
KRH17091	Soybean	cytosol, golgi, plastid	72.22	65.0
Os03t0818200-01	Rice	cytosol	63.58	61.68
KXG37270	Sorghum	cytosol	62.35	61.59
TraesCS5D01G486300.2	Wheat	cytosol	62.65	61.52
TraesCS5B01G486500.1	Wheat	cytosol	62.35	61.21
TraesCS5A01G473600.1	Wheat	cytosol	62.04	60.91
EER93204	Sorghum	cytosol	61.73	60.61
Zm00001d012980_P001	Maize	cytosol	59.57	58.31
Zm00001d012982_P001	Maize	cytosol	62.96	54.69
HORVU5Hr1G112340.7	Barley	cytosol, plastid	62.35	53.87
Solyc01g102730.2.1	Tomato	cytosol, peroxisome, plastid	47.53	47.24
Solyc01g008540.2.1	Tomato	endoplasmic reticulum	45.37	45.51
Solyc01g008550.2.1	Tomato	extracellular, nucleus	44.75	45.31
Solyc03g116910.2.1	Tomato	endoplasmic reticulum, peroxisome, plastid	46.3	45.18
Solyc01g008530.2.1	Tomato	endoplasmic reticulum	45.37	44.82
Solyc06g068440.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plastid	44.44	43.37
Solyc01g087640.2.1	Tomato	cytosol	41.98	41.46
Solyc04g008780.2.1	Tomato	cytosol	40.43	38.76
Zm00001d012981_P002	Maize	cytosol	50.31	36.79
Solyc01g068080.2.1	Tomato	cytosol, extracellular, plastid	35.19	35.62

Protein Annotations

EnsemblPlants:Solyc11g072510.1.1	EnsemblPlantsGene:Solyc11g072510.1	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF369	PFAM:PF01370
SEG:seg	SUPFAM:SSF51735	UniParc:UPI0002769CB6	UniProt:K4DAV8	MapMan:35.1	:

Description

No Description!

Coordinates

chr11:+:55704538..55707728

Molecular Weight (calculated)

35623.0 Da

IEP (calculated)

4.985

GRAVY (calculated)

-0.040

Length

324 amino acids

Sequence
(BLAST)

001: MANGEGEVVC VTGGSGFIGS WLVSSLLDRG YTVHATVKDL NDEKETKHLL GLEGAESRLR LYQIDLLDYD SIVSAITGAV GVFHLASPCI VDEVKDPEND
101: LLSPAIKGTS NVLTASKELG VKRVVVTSSV SSITPNPNWP ADCIMNEDCW TDIEYCKQNG VWYPLSKTLA EKDAWKFAKE KDLDIVVVNP GTVMGPIIPP
201: SLNASMQMIL RLLQGCTDTY KDFFMGLVHV KDVALAHILV YENKSAKGRH MCVEAITHYG DFAAKVAELY PEYNIPRLPK DTQPGLLRAK DGAKKLMDLG
301: LEFIEMEQII RDAVESLKIK GYIS

Best Arabidopsis Sequence Match ( AT5G58490.1 )
(BLAST)

001: MLTDEREVVC VTGASGCIGS WLVHQLLLRG YSVHATVKNL QDEKETKHLE GLEGAATRLH LFEMDLLQYD TVSAAINGCS GVFHLASPCI VDEVQDPQKQ
101: LLDPAVKGTI NVLTAAKEAS VKRVVVTSSI SAITPSPNWP ADKIKNEECW AAEDYCRQNG LWYPLSKTLA EKAAWEFAEE KGLDVVVVNP GTVMGPVIPP
201: SLNASMHMLL RLLQGCTETY ENFFMGSVHF KDVALAHILV YEDPYSKGRH LCVEAISHYG DFVAKVAELY PNYNVPKLPR ETQPGLLRDK NASKKLIDLG
301: LKFISMEEII KEGVESLKSK GFIS

Arabidopsis Description

Cinnamoyl-CoA reductase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FGH3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.