Factsheet for Solyc01g087640.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
mitochondrion 2
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G331600.1	Wheat	cytosol, golgi, plastid	42.07	63.3
VIT_13s0067g00590.t01	Wine grape	endoplasmic reticulum, golgi	60.98	61.16
VIT_13s0067g00620.t01	Wine grape	endoplasmic reticulum, golgi	60.98	61.16
Solyc01g008550.2.1	Tomato	extracellular, nucleus	58.84	60.31
GSMUA_Achr8P24060_001	Banana	plastid	58.23	59.13
GSMUA_Achr8P24070_001	Banana	golgi, plastid	57.62	58.51
GSMUA_Achr8P24040_001	Banana	plastid	57.62	58.51
Solyc01g008540.2.1	Tomato	endoplasmic reticulum	57.32	58.2
Os01t0528800-01	Rice	cytosol, endoplasmic reticulum, plastid	58.23	56.85
Solyc01g008530.2.1	Tomato	endoplasmic reticulum	56.71	56.71
TraesCS4A01G331900.2	Wheat	golgi, unclear	57.01	56.67
AT1G09490.1	Thale cress	golgi	55.49	56.52
CDX94965	Canola	golgi	55.79	56.31
KXG30065	Sorghum	plastid	57.32	56.29
AT1G66800.1	Thale cress	peroxisome, plasma membrane, plastid	54.57	56.11
GSMUA_Achr4P10200_001	Banana	cytosol, golgi, plastid	56.1	56.1
TraesCS5B01G547200.1	Wheat	unclear	56.4	56.06
TraesCS5D01G540800.1	Wheat	plastid	56.4	56.06
CDY45844	Canola	cytosol, golgi, peroxisome	55.49	56.0
Bra038342.1-P	Field mustard	cytosol, golgi, peroxisome	55.49	56.0
TraesCS5D01G541100.1	Wheat	golgi	56.1	55.76
CDY72415	Canola	cytosol, endoplasmic reticulum, peroxisome	55.18	55.69
TraesCS5B01G547000.1	Wheat	golgi	55.79	55.45
CDX94966	Canola	golgi, mitochondrion, peroxisome, plastid	54.27	55.28
CDY64747	Canola	extracellular, golgi, mitochondrion, plastid	54.57	55.25
TraesCS4D01G343400.1	Wheat	cytosol	57.01	55.16
Bra020020.1-P	Field mustard	extracellular, golgi	53.96	54.97
Bra020019.1-P	Field mustard	extracellular, golgi	54.27	54.6
Bra020021.1-P	Field mustard	golgi	53.35	54.35
CDY68009	Canola	cytosol, endoplasmic reticulum, golgi	53.05	54.04
CDX94967	Canola	plasma membrane	53.05	54.04
Bra031666.1-P	Field mustard	golgi	51.83	53.8
AT1G09510.1	Thale cress	cytosol, plastid, vacuole	52.74	53.73
CDX94968	Canola	endoplasmic reticulum, golgi, plastid	53.05	53.37
AT1G09500.1	Thale cress	endoplasmic reticulum	52.74	53.23
TraesCS5A01G517000.1	Wheat	mitochondrion	57.62	52.35
HORVU5Hr1G122150.1	Barley	plastid	56.4	51.39
HORVU4Hr1G085100.1	Barley	cytosol	58.23	51.34
TraesCS5B01G546700.1	Wheat	peroxisome, plastid	34.45	50.0
AT1G09480.1	Thale cress	cytosol	55.79	49.59
Zm00001d015956_P002	Maize	plastid	56.71	48.56
CDY64748	Canola	cytosol	53.35	46.79
Solyc06g068440.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plastid	45.73	45.18
Solyc03g116910.2.1	Tomato	endoplasmic reticulum, peroxisome, plastid	45.43	44.88
Solyc04g008780.2.1	Tomato	cytosol	44.21	42.9
Solyc11g072510.1.1	Tomato	cytosol, extracellular	41.46	41.98
Solyc01g102730.2.1	Tomato	cytosol, peroxisome, plastid	38.41	38.65
Solyc01g068080.2.1	Tomato	cytosol, extracellular, plastid	36.89	37.81

Protein Annotations

EMBL:EF613492	EnsemblPlants:Solyc01g087640.2.1	EnsemblPlantsGene:Solyc01g087640.2	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF407
PFAM:PF01370	SUPFAM:SSF51735	UniParc:UPI000157AD5C	UniProt:A6N6K9	MapMan:35.1	:

Description

Putative alcohol dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A6N6K9]

Coordinates

chr1:-:82584222..82588366

Molecular Weight (calculated)

36008.3 Da

IEP (calculated)

6.855

GRAVY (calculated)

-0.051

Length

328 amino acids

Sequence
(BLAST)

001: MESKNIGEGK VVCVTGASGY IASWLVKLLL QRGYTVNATV RNLKDTSKVD HLLGLDGANE RLHLFEAELL EEQSFDPAVD GCEGVFHTAS PVFLTGKSKE
101: ELVDPAVKGT LNVLRSCAKS PSVRRVVITS STASVICNKN MSTPGAVADE TWYSDPEFCE ERKEWYQLSK TLAEQAAWKF AKENGVDLVT LHPGLVIGPL
201: LQPTLNFSCE AIVDVIKEGK EAWSGGIYRF VDVRDVANAH ILAFEVLSAN GRYCLVGANG YSSLVLKIVQ KLYPSITLPK NFKDGLPLTP HFQVSSEKAK
301: RLGVKFTCLE LSVKDTIESL KEKNFLHI

Best Arabidopsis Sequence Match ( AT5G19440.1 )
(BLAST)

001: MANSGEGKVV CVTGASGYIA SWLVKFLLSR GYTVKASVRD PSDPKKTQHL VSLEGAKERL HLFKADLLEQ GSFDSAIDGC HGVFHTASPF FNDAKDPQAE
101: LIDPAVKGTL NVLNSCAKAS SVKRVVVTSS MAAVGYNGKP RTPDVTVDET WFSDPELCEA SKMWYVLSKT LAEDAAWKLA KEKGLDIVTI NPAMVIGPLL
201: QPTLNTSAAA ILNLINGAKT FPNLSFGWVN VKDVANAHIQ AFEVPSANGR YCLVERVVHH SEIVNILREL YPNLPLPERC VDENPYVPTY QVSKDKTRSL
301: GIDYIPLKVS IKETVESLKE KGFAQF

Arabidopsis Description

At5g19440 [Source:UniProtKB/TrEMBL;Acc:Q29Q34]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.