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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:
  • cytosol 2
  • plastid 2
  • golgi 1
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plastid
Any Predictor:cytosol, golgi, mitochondrion, peroxisome, plastid
BaCelLo:cytosol
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:golgi
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400046912 Potato cytosol, endoplasmic reticulum, plastid 53.68 83.73
VIT_12s0035g02070.t01 Wine grape cytosol 75.46 73.87
AT2G02400.1 Thale cress cytosol 69.02 70.75
CDY09372 Canola cytosol 69.33 70.41
Bra026600.1-P Field mustard cytosol 67.79 68.85
CDY15830 Canola cytosol 67.18 68.22
KRH11704 Soybean cytosol 65.34 64.55
GSMUA_Achr8P29060_001 Banana cytosol 63.8 62.09
Os01t0978400-01 Rice cytosol 57.67 57.49
Solyc11g072510.1.1 Tomato cytosol, extracellular 47.24 47.53
Solyc01g008540.2.1 Tomato endoplasmic reticulum 43.56 43.96
Solyc06g068440.2.1 Tomato cytosol, endoplasmic reticulum, mitochondrion, plastid 43.87 43.07
Solyc03g116910.2.1 Tomato endoplasmic reticulum, peroxisome, plastid 42.94 42.17
Solyc01g008530.2.1 Tomato endoplasmic reticulum 42.02 41.77
Solyc01g008550.2.1 Tomato extracellular, nucleus 40.8 41.56
Solyc01g087640.2.1 Tomato cytosol 38.65 38.41
Solyc04g008780.2.1 Tomato cytosol 36.5 35.21
Solyc01g068080.2.1 Tomato cytosol, extracellular, plastid 31.9 32.5
Protein Annotations
EnsemblPlants:Solyc01g102730.2.1EnsemblPlantsGene:Solyc01g102730.2Gene3D:3.40.50.720GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0016020GO:GO:0050662InterPro:Epimerase_deHydtase
InterPro:NAD(P)-bd_dom_sfPANTHER:PTHR10366PANTHER:PTHR10366:SF295PFAM:PF01370SUPFAM:SSF51735UniParc:UPI0002767E4C
UniProt:K4B1K1MapMan:35.1::::
Description
No Description!
Coordinates
chr1:-:91457312..91462418
Molecular Weight (calculated)
34964.8 Da
IEP (calculated)
5.899
GRAVY (calculated)
0.027
Length
326 amino acids
Sequence
(BLAST)
001: MSTEKPPVCV TGANGFIGSW VVQTLLNRGY TAIYAAIFPG SDPSHLHSLA GASNPGVRIL VHEVNILDAD AVSRAIEGCG GGGVFHVASP CTLEDPVDPQ
101: KELVGPAVQG TINVLTAAKL YNVRRVVLTS SISAMVPNPG WPENKVFDEL SWTDLDYCKS RQKWYPVSKT LAEKAAWEFA EKNGLDVVAI NPATCLGELL
201: QPGLNASCAV LQQLLQGSTD TQEYHWLGAV HVKDVAAAQI LLFESPRASG RYLCTNGIYQ FGDFADRVSK LSPEFSVHRF TGETQPGLVA CKDAAKKLID
301: LGLIFTPVED AVKDTVNSLK AKGLLN
Best Arabidopsis Sequence Match ( AT2G02400.1 )
(BLAST)
001: MAKETVCVTG ANGFIGSWII RTLIEKGYTK IHASIYPGSD PTHLLQLPGS DSKIKIFEAD LLDSDAISRA IDGCAGVFHV ASPCTLDPPV DPEKELVEPA
101: VKGTINVLEA AKRFNVRRVV ITSSISALVP NPNWPEKVPV DESSWSDLDF CKSRQKWYPI SKTLAEKAAW EFSEKHGTNI VTIHPSTCLG PLLQPNLNAS
201: CAVLLQLLQG STETQEHHWL GVVHVKDVAK GHVMLFETPD ASGRFLCTNG IYQFSEFAAL VSKLFPEFAV HKFDKETQPG LTSCNDAAKR LIELGLVFTA
301: VEDAVKETVQ SLRDKGFL
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVQ2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.