Factsheet for VIT_12s0035g02070.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g102730.2.1	Tomato	cytosol, peroxisome, plastid	73.87	75.46
AT2G02400.1	Thale cress	cytosol	69.37	72.64
CDY09372	Canola	cytosol	69.67	72.27
Bra026600.1-P	Field mustard	cytosol	68.77	71.34
PGSC0003DMT400046912	Potato	cytosol, endoplasmic reticulum, plastid	44.74	71.29
CDY15830	Canola	cytosol	67.87	70.41
KRH11704	Soybean	cytosol	68.47	69.09
GSMUA_Achr8P29060_001	Banana	cytosol	61.86	61.49
Os01t0978400-01	Rice	cytosol	54.65	55.66
VIT_06s0004g07130.t01	Wine grape	cytosol	48.05	48.63
VIT_06s0004g02380.t01	Wine grape	endoplasmic reticulum, golgi, plastid	41.14	42.55
VIT_06s0004g02370.t01	Wine grape	endoplasmic reticulum, golgi	39.94	41.3
VIT_09s0070g00240.t01	Wine grape	cytosol	39.64	39.05
VIT_13s0067g00460.t01	Wine grape	endoplasmic reticulum	38.14	38.96
VIT_13s0067g00530.t01	Wine grape	endoplasmic reticulum	38.14	38.96
VIT_13s0064g00290.t01	Wine grape	cytosol, extracellular, plastid	25.23	38.89
VIT_13s0064g00270.t01	Wine grape	cytosol, endoplasmic reticulum	37.84	38.65
VIT_03s0038g04220.t01	Wine grape	endoplasmic reticulum	36.94	38.08
VIT_03s0110g00350.t01	Wine grape	cytosol	36.64	37.65
VIT_13s0047g00940.t01	Wine grape	cytosol	36.34	37.46
VIT_13s0101g00240.t01	Wine grape	cytosol	28.83	37.21
VIT_13s0067g00590.t01	Wine grape	endoplasmic reticulum, golgi	36.34	37.0
VIT_13s0047g00540.t01	Wine grape	cytosol, endoplasmic reticulum, plastid	35.74	36.84
VIT_13s0067g00620.t01	Wine grape	endoplasmic reticulum, golgi	35.74	36.39
VIT_13s0101g00250.t01	Wine grape	cytosol	30.33	35.94
VIT_15s0107g00210.t01	Wine grape	extracellular, plastid	35.44	34.2
VIT_03s0038g04230.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	24.92	33.07
VIT_13s0067g00680.t01	Wine grape	cytosol	27.33	32.85
VIT_13s0047g00550.t01	Wine grape	mitochondrion, vacuole	33.33	32.17
VIT_01s0011g03480.t01	Wine grape	cytosol, plastid	30.63	31.88
VIT_13s0067g00690.t01	Wine grape	cytosol	27.03	29.13
VIT_13s0047g00990.t01	Wine grape	endoplasmic reticulum	36.04	19.67

Protein Annotations

EntrezGene:100245372	wikigene:100245372	Gene3D:3.40.50.720	MapMan:35.1	ProteinID:CBI29614	ProteinID:CBI29614.3
UniProt:D7TGJ2	InterPro:Epimerase_deHydtase	EMBL:FN595990	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0016020	GO:GO:0050662	EntrezGene:LOC100245372
wikigene:LOC100245372	InterPro:NAD(P)-bd_dom_sf	PFAM:PF01370	PANTHER:PTHR10366	PANTHER:PTHR10366:SF295	SUPFAM:SSF51735
UniParc:UPI00015CB542	ArrayExpress:VIT_12s0035g02070	EnsemblPlantsGene:VIT_12s0035g02070	EnsemblPlants:VIT_12s0035g02070.t01	RefSeq:XP_002269382	RefSeq:XP_002269382.1

Description

No Description!

Coordinates

chr12:+:22397942..22403348

Molecular Weight (calculated)

36324.4 Da

IEP (calculated)

5.807

GRAVY (calculated)

-0.045

Length

333 amino acids

Sequence
(BLAST)

001: MAELEADKKK EAVCVTGANG FIGSWLVRTL VEHGYTTIHA SIFPGSDASH LFSLPGAAAA DIVVYEADLL DAEAVARAVE GCTGVFHVAS PCSLEDPKDP
101: EKELLMPAVE GTKNVLEAAR RFQVRRVVLT SSISALVPNP SWPPNIPFNE TSWTDLHYCK SRQKWYPVSK TLAEKAAWEF AGKHGIDVVA IHPATCLGEL
201: LQPRLNASCA VLQQLLEGST ETQEYHWLGA VHVKDVAKAQ VLLFETPAAS GRYLCTDGIY QFADFAERVS KLFPEFPVHR FIGETQPGMM ACKDAAKRLI
301: DLGLVFTPVE DAVKDAVESL KAKGFLEQGK KQS

Best Arabidopsis Sequence Match ( AT2G02400.1 )
(BLAST)

001: MAKETVCVTG ANGFIGSWII RTLIEKGYTK IHASIYPGSD PTHLLQLPGS DSKIKIFEAD LLDSDAISRA IDGCAGVFHV ASPCTLDPPV DPEKELVEPA
101: VKGTINVLEA AKRFNVRRVV ITSSISALVP NPNWPEKVPV DESSWSDLDF CKSRQKWYPI SKTLAEKAAW EFSEKHGTNI VTIHPSTCLG PLLQPNLNAS
201: CAVLLQLLQG STETQEHHWL GVVHVKDVAK GHVMLFETPD ASGRFLCTNG IYQFSEFAAL VSKLFPEFAV HKFDKETQPG LTSCNDAAKR LIELGLVFTA
301: VEDAVKETVQ SLRDKGFL

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVQ2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.