Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plastid
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 3
- extracellular 2
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 2
- golgi 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_06s0004g02370.t01 | Wine grape | endoplasmic reticulum, golgi | 84.47 | 84.47 |
| KRG98697 | Soybean | nucleus | 77.64 | 76.92 |
| Solyc01g008530.2.1 | Tomato | endoplasmic reticulum | 78.26 | 76.83 |
| AT1G51410.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 77.33 | 76.62 |
| Solyc01g008550.2.1 | Tomato | extracellular, nucleus | 76.09 | 76.56 |
| Bra014263.1-P | Field mustard | cytosol | 77.02 | 76.31 |
| CDY03618 | Canola | cytosol | 77.02 | 76.31 |
| CDY65726 | Canola | cytosol | 77.02 | 76.31 |
| Bra023231.1-P | Field mustard | cytosol | 76.4 | 75.69 |
| CDY43911 | Canola | cytosol | 76.09 | 75.38 |
| VIT_03s0110g00350.t01 | Wine grape | cytosol | 75.78 | 75.31 |
| Bra030440.1-P | Field mustard | cytosol | 75.78 | 75.08 |
| KRG98694 | Soybean | endoplasmic reticulum | 75.78 | 75.08 |
| CDY22576 | Canola | cytosol | 75.47 | 74.77 |
| VIT_13s0047g00940.t01 | Wine grape | cytosol | 72.36 | 72.14 |
| VIT_13s0064g00270.t01 | Wine grape | cytosol, endoplasmic reticulum | 72.67 | 71.78 |
| KRH24068 | Soybean | endoplasmic reticulum | 72.05 | 71.38 |
| VIT_13s0064g00290.t01 | Wine grape | cytosol, extracellular, plastid | 47.83 | 71.3 |
| VIT_13s0047g00540.t01 | Wine grape | cytosol, endoplasmic reticulum, plastid | 71.43 | 71.21 |
| Solyc01g008540.2.1 | Tomato | endoplasmic reticulum | 70.81 | 70.59 |
| KRH24066 | Soybean | mitochondrion | 73.91 | 70.21 |
| VIT_13s0067g00530.t01 | Wine grape | endoplasmic reticulum | 69.88 | 69.02 |
| VIT_13s0067g00460.t01 | Wine grape | endoplasmic reticulum | 69.88 | 69.02 |
| VIT_13s0101g00240.t01 | Wine grape | cytosol | 55.28 | 68.99 |
| VIT_13s0067g00620.t01 | Wine grape | endoplasmic reticulum, golgi | 69.88 | 68.81 |
| KRH24064 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 69.88 | 68.6 |
| VIT_13s0067g00590.t01 | Wine grape | endoplasmic reticulum, golgi | 69.25 | 68.2 |
| VIT_15s0107g00210.t01 | Wine grape | extracellular, plastid | 70.81 | 66.09 |
| VIT_13s0101g00250.t01 | Wine grape | cytosol | 56.83 | 65.12 |
| VIT_13s0067g00690.t01 | Wine grape | cytosol | 57.76 | 60.19 |
| VIT_13s0067g00680.t01 | Wine grape | cytosol | 51.55 | 59.93 |
| VIT_13s0047g00550.t01 | Wine grape | mitochondrion, vacuole | 63.66 | 59.42 |
| VIT_09s0070g00240.t01 | Wine grape | cytosol | 50.93 | 48.52 |
| VIT_06s0004g07130.t01 | Wine grape | cytosol | 48.76 | 47.72 |
| VIT_03s0038g04220.t01 | Wine grape | endoplasmic reticulum | 44.72 | 44.58 |
| VIT_01s0011g03480.t01 | Wine grape | cytosol, plastid | 41.93 | 42.19 |
| VIT_12s0035g02070.t01 | Wine grape | cytosol | 42.55 | 41.14 |
| VIT_13s0047g00990.t01 | Wine grape | endoplasmic reticulum | 72.36 | 38.2 |
| VIT_03s0038g04230.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 29.19 | 37.45 |
Protein Annotations
| EntrezGene:100255334 | wikigene:100255334 | Gene3D:3.40.50.720 | MapMan:35.1 | ProteinID:CBI16353 | ProteinID:CBI16353.3 |
| UniProt:D7SL25 | InterPro:Epimerase_deHydtase | EMBL:FN594951 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0050662 | EntrezGene:LOC100255334 | wikigene:LOC100255334 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF01370 | PANTHER:PTHR10366 |
| PANTHER:PTHR10366:SF407 | SUPFAM:SSF51735 | TIGR:TC51769 | UniParc:UPI00015C81D7 | ArrayExpress:VIT_06s0004g02380 | EnsemblPlantsGene:VIT_06s0004g02380 |
| EnsemblPlants:VIT_06s0004g02380.t01 | RefSeq:XP_002285368 | RefSeq:XP_002285368.1 | : | : | : |
Description
No Description!
Coordinates
chr6:-:2818767..2825190
Molecular Weight (calculated)
35207.3 Da
IEP (calculated)
5.983
GRAVY (calculated)
0.052
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSGVVCVTG ASGYIASWLV KLLLQRGYTV KASVRDPNDP KKTEHLLSLD GAKERLHLFK ANLLEEGSFD SIVEGCVGVF HTASPFFHAV TDPQAELIDP
101: AVKGTLNVLG SCAKASSVKR VVVTSSIAAV AYNRNPRTPD VVVDETWFTD PDFCKGLQLW YVVSKTLAED AAWKFAKEKG IDMVTINPAM VIGPLLQPTL
201: NTSAAAILNL INGGQTFPNA SFGWVNVKDV AEAHIQAFEV PSASGRYCLV ERVVHYSELV KILKELFPDF QLPEKCADDK PFVPTFQVSK EKAKSLGIEF
301: IPLEVSLKET VESLKEKEFF SP
101: AVKGTLNVLG SCAKASSVKR VVVTSSIAAV AYNRNPRTPD VVVDETWFTD PDFCKGLQLW YVVSKTLAED AAWKFAKEKG IDMVTINPAM VIGPLLQPTL
201: NTSAAAILNL INGGQTFPNA SFGWVNVKDV AEAHIQAFEV PSASGRYCLV ERVVHYSELV KILKELFPDF QLPEKCADDK PFVPTFQVSK EKAKSLGIEF
301: IPLEVSLKET VESLKEKEFF SP
001: MANSGEGKVV CVTGASGYIA SWLVKFLLSR GYTVKASVRD PSDPKKTQHL VSLEGAKERL HLFKADLLEQ GSFDSAIDGC HGVFHTASPF FNDAKDPQAE
101: LIDPAVKGTL NVLNSCAKAS SVKRVVVTSS MAAVGYNGKP RTPDVTVDET WFSDPELCEA SKMWYVLSKT LAEDAAWKLA KEKGLDIVTI NPAMVIGPLL
201: QPTLNTSAAA ILNLINGAKT FPNLSFGWVN VKDVANAHIQ AFEVPSANGR YCLVERVVHH SEIVNILREL YPNLPLPERC VDENPYVPTY QVSKDKTRSL
301: GIDYIPLKVS IKETVESLKE KGFAQF
101: LIDPAVKGTL NVLNSCAKAS SVKRVVVTSS MAAVGYNGKP RTPDVTVDET WFSDPELCEA SKMWYVLSKT LAEDAAWKLA KEKGLDIVTI NPAMVIGPLL
201: QPTLNTSAAA ILNLINGAKT FPNLSFGWVN VKDVANAHIQ AFEVPSANGR YCLVERVVHH SEIVNILREL YPNLPLPERC VDENPYVPTY QVSKDKTRSL
301: GIDYIPLKVS IKETVESLKE KGFAQF
Arabidopsis Description
At5g19440 [Source:UniProtKB/TrEMBL;Acc:Q29Q34]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.