Factsheet for VIT_13s0067g00690.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 2
mitochondrion 1
golgi 4
extracellular 3
plasma membrane 3
endoplasmic reticulum 3
vacuole 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	cytosol, golgi, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0101g00240.t01	Wine grape	cytosol	57.28	68.6
VIT_13s0047g00940.t01	Wine grape	cytosol	69.58	66.56
VIT_13s0047g00540.t01	Wine grape	cytosol, endoplasmic reticulum, plastid	68.61	65.63
VIT_13s0067g00530.t01	Wine grape	endoplasmic reticulum	68.61	65.03
VIT_13s0067g00460.t01	Wine grape	endoplasmic reticulum	68.61	65.03
VIT_13s0064g00270.t01	Wine grape	cytosol, endoplasmic reticulum	68.61	65.03
VIT_15s0107g00210.t01	Wine grape	extracellular, plastid	68.61	61.45
VIT_13s0064g00290.t01	Wine grape	cytosol, extracellular, plastid	42.72	61.11
VIT_03s0110g00350.t01	Wine grape	cytosol	62.46	59.57
VIT_13s0067g00590.t01	Wine grape	endoplasmic reticulum, golgi	62.78	59.33
VIT_13s0067g00620.t01	Wine grape	endoplasmic reticulum, golgi	61.81	58.41
VIT_13s0101g00250.t01	Wine grape	cytosol	52.75	58.01
VIT_06s0004g02380.t01	Wine grape	endoplasmic reticulum, golgi, plastid	60.19	57.76
VIT_13s0067g00680.t01	Wine grape	cytosol	50.81	56.68
VIT_06s0004g02370.t01	Wine grape	endoplasmic reticulum, golgi	58.25	55.9
GSMUA_Achr8P24040_001	Banana	plastid	58.25	55.73
GSMUA_Achr8P24060_001	Banana	plastid	57.61	55.11
GSMUA_Achr8P24070_001	Banana	golgi, plastid	57.61	55.11
VIT_13s0047g00550.t01	Wine grape	mitochondrion, vacuole	60.84	54.49
TraesCS4A01G331600.1	Wheat	cytosol, golgi, plastid	36.89	52.29
GSMUA_Achr4P10200_001	Banana	cytosol, golgi, plastid	55.02	51.83
TraesCS5B01G547000.1	Wheat	golgi	54.05	50.61
TraesCS5B01G546700.1	Wheat	peroxisome, plastid	36.89	50.44
TraesCS5D01G540800.1	Wheat	plastid	53.72	50.3
TraesCS4A01G331900.2	Wheat	golgi, unclear	53.72	50.3
TraesCS5B01G547200.1	Wheat	unclear	53.07	49.7
TraesCS5D01G541100.1	Wheat	golgi	52.75	49.39
Os01t0528800-01	Rice	cytosol, endoplasmic reticulum, plastid	53.4	49.11
KXG30065	Sorghum	plastid	52.75	48.8
TraesCS4D01G343400.1	Wheat	cytosol	50.81	46.31
HORVU5Hr1G122150.1	Barley	plastid	53.72	46.11
Zm00001d015956_P002	Maize	plastid	53.4	43.08
HORVU4Hr1G085100.1	Barley	cytosol	51.46	42.74
TraesCS5A01G517000.1	Wheat	mitochondrion	49.84	42.66
VIT_03s0038g04220.t01	Wine grape	endoplasmic reticulum	38.51	36.84
VIT_01s0011g03480.t01	Wine grape	cytosol, plastid	37.22	35.94
VIT_13s0047g00990.t01	Wine grape	endoplasmic reticulum	69.26	35.08
VIT_06s0004g07130.t01	Wine grape	cytosol	36.57	34.35
VIT_09s0070g00240.t01	Wine grape	cytosol	37.22	34.02
VIT_03s0038g04230.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	26.86	33.07
VIT_12s0035g02070.t01	Wine grape	cytosol	29.13	27.03

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	ProteinID:CCB62581	ProteinID:CCB62581.1	InterPro:Epimerase_deHydtase	UniProt:F6I6L3
EMBL:FN596756	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0050662	InterPro:NAD(P)-bd_dom_sf
PFAM:PF01370	PANTHER:PTHR10366	PANTHER:PTHR10366:SF407	SUPFAM:SSF51735	UniParc:UPI000210AB79	ArrayExpress:VIT_13s0067g00690
EnsemblPlantsGene:VIT_13s0067g00690	EnsemblPlants:VIT_13s0067g00690.t01	:	:	:	:

Description

No Description!

Coordinates

chr13_random:-:378484..380418

Molecular Weight (calculated)

34094.7 Da

IEP (calculated)

5.041

GRAVY (calculated)

-0.029

Length

309 amino acids

Sequence
(BLAST)

001: MSGQGKVVCE WSFWVHSFMA GEALAPTWLY CQSNNNLTKT GHLLALDGAK ERLHLFKADL VEEGSFDSVI EGCDGVFHTA SPVAVEVSDP QAELIDPALR
101: GTINILRSCA KVPSVKRVVV TSSMATVVFN GKSLTPDVLV DESWFSNPLL LEQSKLWYML SKTLAEEAAW KFAKENGIDM VTLNPGWVIG PLSHPTPSLR
201: AQTFPNTPYT WVDVRDVANA HIQAYELLEA SGRFCLVETV SDSSETLKIL HKFYPALHIS EKPADDTPYV PAFQVSQEKA KGLGIHFTPL EVSLKDTIES
301: LKENNLISF

Best Arabidopsis Sequence Match ( AT1G09480.2 )
(BLAST)

001: MNGGGKLVCV TGASGYIASW IVKLLLLRGY TVKATVRDLT DRKKTEHLLA LDGAKERLKL FKADLLEESS FEQAIEGCDA VFHTASPVFF TVKDPQTELI
101: DPALKGTMNV LNTCKETPSV RRVILTSSTA AVLFRQPPVE ASDVVDETFF SDPSLCRETK NWYPLSKILA ENAAWEFAKD NGIDMVVLNP GFIFGPLLQP
201: TLNFSVELIV DFINGKNPFN SRFYRFVDVR DVALAHIKAL ETPSANGRYI IDGPIMSVSD IIDILRELLP DLCIADTNEE SVMNEMLCKV CVEKVKNLGV
301: EFTPMKSSLR DTIVSLKEKC LL

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I0Z5]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.