Factsheet for VIT_13s0067g00530.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 2
extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	golgi
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0067g00460.t01	Wine grape	endoplasmic reticulum	99.69	99.69
VIT_13s0064g00270.t01	Wine grape	cytosol, endoplasmic reticulum	78.22	78.22
VIT_13s0047g00540.t01	Wine grape	cytosol, endoplasmic reticulum, plastid	76.38	77.09
VIT_13s0047g00940.t01	Wine grape	cytosol	76.38	77.09
VIT_13s0064g00290.t01	Wine grape	cytosol, extracellular, plastid	50.92	76.85
VIT_13s0101g00240.t01	Wine grape	cytosol	60.43	76.36
VIT_13s0101g00250.t01	Wine grape	cytosol	62.88	72.95
VIT_15s0107g00210.t01	Wine grape	extracellular, plastid	75.46	71.3
VIT_06s0004g02380.t01	Wine grape	endoplasmic reticulum, golgi, plastid	69.02	69.88
VIT_03s0110g00350.t01	Wine grape	cytosol	69.33	69.75
VIT_13s0067g00690.t01	Wine grape	cytosol	65.03	68.61
VIT_13s0067g00620.t01	Wine grape	endoplasmic reticulum, golgi	68.4	68.2
VIT_06s0004g02370.t01	Wine grape	endoplasmic reticulum, golgi	67.18	68.01
VIT_13s0067g00590.t01	Wine grape	endoplasmic reticulum, golgi	67.79	67.58
TraesCS4A01G331600.1	Wheat	cytosol, golgi, plastid	45.09	67.43
GSMUA_Achr8P24070_001	Banana	golgi, plastid	66.56	67.18
GSMUA_Achr8P24060_001	Banana	plastid	65.95	66.56
GSMUA_Achr8P24040_001	Banana	plastid	65.34	65.94
VIT_13s0047g00550.t01	Wine grape	mitochondrion, vacuole	69.63	65.8
VIT_13s0067g00680.t01	Wine grape	cytosol	54.6	64.26
GSMUA_Achr4P10200_001	Banana	cytosol, golgi, plastid	64.11	63.72
KXG30065	Sorghum	plastid	61.66	60.18
TraesCS4A01G331900.2	Wheat	golgi, unclear	60.74	60.0
TraesCS5D01G540800.1	Wheat	plastid	60.12	59.39
TraesCS5B01G547200.1	Wheat	unclear	59.82	59.09
TraesCS5B01G547000.1	Wheat	golgi	59.82	59.09
Os01t0528800-01	Rice	cytosol, endoplasmic reticulum, plastid	60.74	58.93
TraesCS5D01G541100.1	Wheat	golgi	59.51	58.79
TraesCS4D01G343400.1	Wheat	cytosol	57.98	55.75
HORVU5Hr1G122150.1	Barley	plastid	60.12	54.44
TraesCS5A01G517000.1	Wheat	mitochondrion	58.28	52.63
Zm00001d015956_P002	Maize	plastid	61.66	52.48
HORVU4Hr1G085100.1	Barley	cytosol	58.59	51.34
TraesCS5B01G546700.1	Wheat	peroxisome, plastid	35.58	51.33
VIT_06s0004g07130.t01	Wine grape	cytosol	46.01	45.59
VIT_03s0038g04220.t01	Wine grape	endoplasmic reticulum	44.79	45.2
VIT_09s0070g00240.t01	Wine grape	cytosol	46.32	44.67
VIT_01s0011g03480.t01	Wine grape	cytosol, plastid	43.56	44.38
VIT_13s0047g00990.t01	Wine grape	endoplasmic reticulum	76.99	41.15
VIT_03s0038g04230.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	29.75	38.65
VIT_12s0035g02070.t01	Wine grape	cytosol	38.96	38.14

Protein Annotations

EntrezGene:100247331	wikigene:100247331	Gene3D:3.40.50.720	MapMan:35.1	ProteinID:CBI40601	ProteinID:CBI40601.3
UniProt:D7UCY6	InterPro:Epimerase_deHydtase	EMBL:FN596756	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	EntrezGene:LOC100247331	wikigene:LOC100247331	InterPro:NAD(P)-bd_dom_sf	PFAM:PF01370	PANTHER:PTHR10366
PANTHER:PTHR10366:SF407	SUPFAM:SSF51735	UniParc:UPI00015CD74E	ArrayExpress:VIT_13s0067g00530	EnsemblPlantsGene:VIT_13s0067g00530	EnsemblPlants:VIT_13s0067g00530.t01
RefSeq:XP_002268122	RefSeq:XP_002268122.1	:	:	:	:

Description

No Description!

Coordinates

chr13_random:-:301625..303778

Molecular Weight (calculated)

36073.5 Da

IEP (calculated)

6.404

GRAVY (calculated)

-0.097

Length

326 amino acids

Sequence
(BLAST)

001: MSTGEGKVVC VTGAAGFVAS WLVKLLLQRG YTVRATVRDP NDPKKTEHLL SLDGAKERLR LFKADLLEEG SFDPVVDGCD GVFHTASPVV MQVTDPQTEL
101: IDPALKGTIN VLRSCSKVPS VKRVVVTSSM SAVEQNGKPL TPEVIIDESW FSDAVLCKES KLWYKLSKTL AEEAAWKFSK ENGIDMVMIN PGWVLGPLLQ
201: PTLNLSVEEI LKLLNGVQTF PKTTSYTWVD ARDVANAHIQ AFELPEASGR YCLVGTVSHR SETLNILHKL YPAIHIPEKW EDGQTCVPTF RVSQEKAKSL
301: GIHFTPLEVS MKDTVESLKE KNFISF

Best Arabidopsis Sequence Match ( AT1G09490.1 )
(BLAST)

001: MNCGGKVVCV TGASGYIASW IVKLLLLRGY TVNATVRDPK DKKKTEHLLA LDGAKERLKL FKADLLEESS FDQAIDGCDA VFHTASPVLF TVTDPQTELI
101: DPALKGTINV LNTCKQVSSV KRVILTSSTA AVLSRQPPIG PNDLVDETFF SDPSLCRETK NWYSLSKILA ENAAWQFAKD NGIDMVVLNP GFICGPLLQP
201: TLNMSVELIV DFINGKNPFN KRYYRFSDVR DVALVHIKAL ETPSANGRYI IDGPNMSVND IIDILRKLFP DLSIADTNEE SEMNEMICQV CVEKVKNLGV
301: EFTPMKSSLR DTIVSLKEKC LL

Arabidopsis Description

At1g09490/F14J9_15 [Source:UniProtKB/TrEMBL;Acc:O80532]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.