Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_13s0067g00620.t01 | Wine grape | endoplasmic reticulum, golgi | 88.69 | 88.69 |
| VIT_03s0110g00350.t01 | Wine grape | cytosol | 74.01 | 74.69 |
| VIT_13s0047g00540.t01 | Wine grape | cytosol, endoplasmic reticulum, plastid | 70.03 | 70.9 |
| VIT_13s0047g00940.t01 | Wine grape | cytosol | 69.72 | 70.59 |
| VIT_13s0064g00290.t01 | Wine grape | cytosol, extracellular, plastid | 45.87 | 69.44 |
| VIT_13s0101g00240.t01 | Wine grape | cytosol | 54.74 | 69.38 |
| VIT_06s0004g02380.t01 | Wine grape | endoplasmic reticulum, golgi, plastid | 68.2 | 69.25 |
| VIT_13s0064g00270.t01 | Wine grape | cytosol, endoplasmic reticulum | 68.81 | 69.02 |
| VIT_13s0067g00460.t01 | Wine grape | endoplasmic reticulum | 67.58 | 67.79 |
| VIT_13s0067g00530.t01 | Wine grape | endoplasmic reticulum | 67.58 | 67.79 |
| VIT_06s0004g02370.t01 | Wine grape | endoplasmic reticulum, golgi | 66.36 | 67.39 |
| GSMUA_Achr8P24060_001 | Banana | plastid | 66.36 | 67.18 |
| GSMUA_Achr8P24070_001 | Banana | golgi, plastid | 66.06 | 66.87 |
| GSMUA_Achr8P24040_001 | Banana | plastid | 65.44 | 66.25 |
| TraesCS4A01G331600.1 | Wheat | cytosol, golgi, plastid | 43.43 | 65.14 |
| VIT_13s0101g00250.t01 | Wine grape | cytosol | 55.96 | 65.12 |
| VIT_15s0107g00210.t01 | Wine grape | extracellular, plastid | 67.28 | 63.77 |
| GSMUA_Achr4P10200_001 | Banana | cytosol, golgi, plastid | 63.61 | 63.41 |
| VIT_13s0067g00690.t01 | Wine grape | cytosol | 59.33 | 62.78 |
| Solyc01g087640.2.1 | Tomato | cytosol | 61.16 | 60.98 |
| VIT_13s0067g00680.t01 | Wine grape | cytosol | 51.38 | 60.65 |
| TraesCS4A01G331900.2 | Wheat | golgi, unclear | 61.16 | 60.61 |
| TraesCS5D01G540800.1 | Wheat | plastid | 60.55 | 60.0 |
| TraesCS5B01G547000.1 | Wheat | golgi | 60.24 | 59.7 |
| KXG30065 | Sorghum | plastid | 60.86 | 59.58 |
| TraesCS5B01G547200.1 | Wheat | unclear | 59.63 | 59.09 |
| AT1G66800.1 | Thale cress | peroxisome, plasma membrane, plastid | 57.49 | 58.93 |
| Os01t0528800-01 | Rice | cytosol, endoplasmic reticulum, plastid | 60.55 | 58.93 |
| TraesCS5D01G541100.1 | Wheat | golgi | 59.33 | 58.79 |
| VIT_13s0047g00550.t01 | Wine grape | mitochondrion, vacuole | 60.86 | 57.68 |
| AT1G09510.1 | Thale cress | cytosol, plastid, vacuole | 55.96 | 56.83 |
| TraesCS4D01G343400.1 | Wheat | cytosol | 58.72 | 56.64 |
| CDX94965 | Canola | golgi | 55.96 | 56.31 |
| Bra020021.1-P | Field mustard | golgi | 55.05 | 55.9 |
| CDY68009 | Canola | cytosol, endoplasmic reticulum, golgi | 54.74 | 55.59 |
| CDY64747 | Canola | extracellular, golgi, mitochondrion, plastid | 55.05 | 55.56 |
| Bra020019.1-P | Field mustard | extracellular, golgi | 55.35 | 55.52 |
| Bra031666.1-P | Field mustard | golgi | 53.52 | 55.38 |
| TraesCS5B01G546700.1 | Wheat | peroxisome, plastid | 38.23 | 55.31 |
| CDX94966 | Canola | golgi, mitochondrion, peroxisome, plastid | 54.43 | 55.28 |
| HORVU5Hr1G122150.1 | Barley | plastid | 60.86 | 55.28 |
| Bra020020.1-P | Field mustard | extracellular, golgi | 54.13 | 54.97 |
| AT1G09490.1 | Thale cress | golgi | 53.52 | 54.35 |
| AT1G09500.1 | Thale cress | endoplasmic reticulum | 53.82 | 54.15 |
| CDY72415 | Canola | cytosol, endoplasmic reticulum, peroxisome | 53.82 | 54.15 |
| CDX94967 | Canola | plasma membrane | 52.91 | 53.73 |
| Bra038342.1-P | Field mustard | cytosol, golgi, peroxisome | 53.21 | 53.54 |
| CDY45844 | Canola | cytosol, golgi, peroxisome | 53.21 | 53.54 |
| TraesCS5A01G517000.1 | Wheat | mitochondrion | 58.72 | 53.19 |
| CDX94968 | Canola | endoplasmic reticulum, golgi, plastid | 52.91 | 53.07 |
| HORVU4Hr1G085100.1 | Barley | cytosol | 59.94 | 52.69 |
| Zm00001d015956_P002 | Maize | plastid | 59.94 | 51.17 |
| CDY64748 | Canola | cytosol | 55.66 | 48.66 |
| AT1G09480.1 | Thale cress | cytosol | 54.43 | 48.24 |
| VIT_09s0070g00240.t01 | Wine grape | cytosol | 46.48 | 44.97 |
| VIT_03s0038g04220.t01 | Wine grape | endoplasmic reticulum | 44.34 | 44.89 |
| VIT_06s0004g07130.t01 | Wine grape | cytosol | 44.34 | 44.07 |
| VIT_01s0011g03480.t01 | Wine grape | cytosol, plastid | 42.2 | 43.12 |
| VIT_03s0038g04230.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 29.36 | 38.25 |
| VIT_13s0047g00990.t01 | Wine grape | endoplasmic reticulum | 69.42 | 37.21 |
| VIT_12s0035g02070.t01 | Wine grape | cytosol | 37.0 | 36.34 |
Protein Annotations
| EntrezGene:100247477 | wikigene:100247477 | Gene3D:3.40.50.720 | MapMan:35.1 | EMBL:AM427337 | EMBL:AM454817 |
| ProteinID:CAN65489 | ProteinID:CAN65489.1 | ProteinID:CAN71341 | ProteinID:CAN71341.1 | ProteinID:CBI40605 | ProteinID:CBI40605.3 |
| UniProt:D7UCZ0 | InterPro:Epimerase_deHydtase | EMBL:FN596756 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0050662 | EntrezGene:LOC100247477 | wikigene:LOC100247477 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF01370 | PANTHER:PTHR10366 |
| PANTHER:PTHR10366:SF407 | SUPFAM:SSF51735 | TMHMM:TMhelix | UniParc:UPI00019861D5 | ArrayExpress:VIT_13s0067g00590 | EnsemblPlantsGene:VIT_13s0067g00590 |
| EnsemblPlants:VIT_13s0067g00590.t01 | RefSeq:XP_002267167 | RefSeq:XP_002267167.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr13_random:-:317171..320124
Molecular Weight (calculated)
36172.8 Da
IEP (calculated)
4.988
GRAVY (calculated)
0.088
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEAVAEKVV CVTGAAGFIA SWLVKLLLLR GYTVKATLRN PDDPTKTQHL LALEGAKERL HLFKADLLEE GSFDSIVEGC EGVFHTASPV LLEVANPKVE
101: LIDPAVNGTL NVLRSCTKVP SIRRVVVTSS IVATIFNGKT LTPDVIVDET WFSDPAFCEE SKLWYVLSKT LAEEAAWKFA KENGIDLVTM NPGFVIGPFL
201: QPTINLTMEI ILNLINGGAQ TFPSSTYRWV DVRDVANAHV QAFEISSASG RYCLVERVTY CSEAIKILQE LYPALHLPQK NADDEPPMPT YQISKEKVKS
301: LAIDFIPLEV SLKDTMENLK EKNFIKL
101: LIDPAVNGTL NVLRSCTKVP SIRRVVVTSS IVATIFNGKT LTPDVIVDET WFSDPAFCEE SKLWYVLSKT LAEEAAWKFA KENGIDLVTM NPGFVIGPFL
201: QPTINLTMEI ILNLINGGAQ TFPSSTYRWV DVRDVANAHV QAFEISSASG RYCLVERVTY CSEAIKILQE LYPALHLPQK NADDEPPMPT YQISKEKVKS
301: LAIDFIPLEV SLKDTMENLK EKNFIKL
001: MNGEGKVVCV TGASGYIASW IVKLLLLRGY TVRATVRNPM DTKKTNHLLT LEGASERLKL FKSDLLEEGS FDQAIEGCDG VFHTASPVSL TVTDPQTEMI
101: DPAVNGTLNV LRTCAKVSSV KRVIVTSSTA ATLSINPNDV VDETVFTDLS VYLAMKAWYG YSKTLAEETA WRFAKENGID LVVMNPGNVI GPVLQPTLNY
201: SVEVIVDLIN GKNPSNSFYY RFMDVRDVSL AHIKAFEVPS ASGRYILADP DVTMKDIQKL LHELFPDLCR VDKDNENEVG EMAYKVCVDK LKSLGIEFTP
301: IKESLKDTVV SLKERCLLI
101: DPAVNGTLNV LRTCAKVSSV KRVIVTSSTA ATLSINPNDV VDETVFTDLS VYLAMKAWYG YSKTLAEETA WRFAKENGID LVVMNPGNVI GPVLQPTLNY
201: SVEVIVDLIN GKNPSNSFYY RFMDVRDVSL AHIKAFEVPS ASGRYILADP DVTMKDIQKL LHELFPDLCR VDKDNENEVG EMAYKVCVDK LKSLGIEFTP
301: IKESLKDTVV SLKERCLLI
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HQ07]
SUBAcon: [peroxisome,plastid,plasma membrane]
SUBAcon: [peroxisome,plastid,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.