Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 2
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 2
- golgi 2
- mitochondrion 1
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031666.1-P | Field mustard | golgi | 75.38 | 77.53 |
| CDY68009 | Canola | cytosol, endoplasmic reticulum, golgi | 76.31 | 77.02 |
| CDY72415 | Canola | cytosol, endoplasmic reticulum, peroxisome | 76.0 | 76.0 |
| CDY45844 | Canola | cytosol, golgi, peroxisome | 75.69 | 75.69 |
| Bra038342.1-P | Field mustard | cytosol, golgi, peroxisome | 75.69 | 75.69 |
| AT1G09510.1 | Thale cress | cytosol, plastid, vacuole | 71.69 | 72.36 |
| AT1G09490.1 | Thale cress | golgi | 70.46 | 71.12 |
| AT1G66800.1 | Thale cress | peroxisome, plasma membrane, plastid | 65.85 | 67.08 |
| AT1G09480.1 | Thale cress | cytosol | 68.31 | 60.16 |
| TraesCS4A01G331600.1 | Wheat | cytosol, golgi, plastid | 40.0 | 59.63 |
| AT5G19440.1 | Thale cress | plastid | 55.08 | 54.91 |
| VIT_13s0067g00590.t01 | Wine grape | endoplasmic reticulum, golgi | 54.15 | 53.82 |
| GSMUA_Achr8P24060_001 | Banana | plastid | 53.23 | 53.56 |
| AT1G51410.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 53.54 | 53.54 |
| GSMUA_Achr8P24070_001 | Banana | golgi, plastid | 52.92 | 53.25 |
| Solyc01g087640.2.1 | Tomato | cytosol | 53.23 | 52.74 |
| TraesCS4A01G331900.2 | Wheat | golgi, unclear | 52.62 | 51.82 |
| TraesCS5B01G547200.1 | Wheat | unclear | 52.62 | 51.82 |
| TraesCS5D01G540800.1 | Wheat | plastid | 52.62 | 51.82 |
| VIT_13s0067g00620.t01 | Wine grape | endoplasmic reticulum, golgi | 52.0 | 51.68 |
| GSMUA_Achr4P10200_001 | Banana | cytosol, golgi, plastid | 52.0 | 51.52 |
| TraesCS5D01G541100.1 | Wheat | golgi | 52.31 | 51.52 |
| GSMUA_Achr8P24040_001 | Banana | plastid | 51.08 | 51.39 |
| TraesCS5B01G547000.1 | Wheat | golgi | 51.69 | 50.91 |
| KXG30065 | Sorghum | plastid | 52.0 | 50.6 |
| TraesCS4D01G343400.1 | Wheat | cytosol | 51.69 | 49.56 |
| Os01t0528800-01 | Rice | cytosol, endoplasmic reticulum, plastid | 50.77 | 49.11 |
| HORVU5Hr1G122150.1 | Barley | plastid | 53.85 | 48.61 |
| TraesCS5A01G517000.1 | Wheat | mitochondrion | 52.0 | 46.81 |
| HORVU4Hr1G085100.1 | Barley | cytosol | 52.0 | 45.43 |
| TraesCS5B01G546700.1 | Wheat | peroxisome, plastid | 31.08 | 44.69 |
| Zm00001d015956_P002 | Maize | plastid | 51.38 | 43.6 |
| AT1G80820.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 43.69 | 42.77 |
| AT1G15950.1 | Thale cress | cytosol | 44.92 | 42.44 |
| AT4G35420.1 | Thale cress | extracellular | 42.15 | 42.02 |
| AT5G58490.1 | Thale cress | cytosol | 37.85 | 37.96 |
| AT2G02400.1 | Thale cress | cytosol | 35.38 | 36.16 |
| AT1G68540.1 | Thale cress | cytosol | 34.15 | 34.58 |
| AT1G25460.1 | Thale cress | cytosol, plastid | 32.62 | 33.23 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | EntrezGene:837475 | ProteinID:AAC33210.1 | ProteinID:AEE28452.1 | ProteinID:AEE28454.1 |
| EMBL:AF424567 | EMBL:AF462838 | EMBL:AK316987 | ArrayExpress:AT1G09500 | EnsemblPlantsGene:AT1G09500 | RefSeq:AT1G09500 |
| TAIR:AT1G09500 | RefSeq:AT1G09500-TAIR-G | EnsemblPlants:AT1G09500.1 | TAIR:AT1G09500.1 | EMBL:BT000479 | InterPro:Epimerase_deHydtase |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004022 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0050662 | GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_001031012.1 | RefSeq:NP_172421.1 | UniProt:O80533 |
| PFAM:PF01370 | PO:PO:0000293 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009006 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009047 |
| PO:PO:0020030 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF492 | SUPFAM:SSF51735 |
| UniParc:UPI00000AC1D3 | : | : | : | : | : |
Description
At1g09500/F14J9_16 [Source:UniProtKB/TrEMBL;Acc:O80533]
Coordinates
chr1:+:3066674..3068790
Molecular Weight (calculated)
35775.2 Da
IEP (calculated)
5.470
GRAVY (calculated)
0.066
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MADGGKVVCV TGASGYIASW IVKLLLFRGY TINATVRDPK DRKKTDHLLA LDGAKERLKL FKADLLDEGS FELAIDGCET VFHTASPVAI TVKTDPQVEL
101: INPAVNGTIN VLRTCTKVSS VKRVILTSSM AAVLAPETKL GPNDVVDETF FTNPSFAEER KQWYVLSKTL AEDAAWRFAK DNEIDLIVLN PGLVTGPILQ
201: PTLNFSVAVI VELMKGKNPF NTTHHRFVDV RDVALAHVKA LETPSANGRY IIDGPVVTIK DIENVLREFF PDLCIADRNE DITELNSVTF NVCLDKVKSL
301: GIIEFTPTET SLRDTVLSLK EKCLV
101: INPAVNGTIN VLRTCTKVSS VKRVILTSSM AAVLAPETKL GPNDVVDETF FTNPSFAEER KQWYVLSKTL AEDAAWRFAK DNEIDLIVLN PGLVTGPILQ
201: PTLNFSVAVI VELMKGKNPF NTTHHRFVDV RDVALAHVKA LETPSANGRY IIDGPVVTIK DIENVLREFF PDLCIADRNE DITELNSVTF NVCLDKVKSL
301: GIIEFTPTET SLRDTVLSLK EKCLV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.