Factsheet for AT1G15950.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33365	Canola	cytosol	96.22	96.5
CDY35052	Canola	cytosol	77.03	96.01
Bra026090.1-P	Field mustard	cytosol	94.77	95.6
Bra026737.1-P	Field mustard	cytosol	94.48	94.75
CDY52857	Canola	cytosol	94.19	94.46
CDX81743	Canola	cytosol	93.31	94.41
AT1G80820.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	81.1	84.04
PGSC0003DMT400051049	Potato	endoplasmic reticulum, peroxisome, plastid	76.16	78.92
VIT_09s0070g00240.t01	Wine grape	cytosol	77.33	78.7
Solyc03g116910.2.1	Tomato	endoplasmic reticulum, peroxisome, plastid	74.13	76.81
PGSC0003DMT400073398	Potato	cytosol, endoplasmic reticulum, mitochondrion, plastid	73.84	76.51
Solyc06g068440.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plastid	73.84	76.51
KRH47350	Soybean	cytosol	72.67	75.3
KRH44552	Soybean	cytosol	72.38	74.77
KRH09656	Soybean	cytosol	72.67	74.4
KRH23636	Soybean	cytosol	70.93	72.19
GSMUA_Achr5P04460_001	Banana	cytosol, peroxisome, plastid	68.31	69.94
TraesCS5A01G225100.3	Wheat	cytosol, plastid	70.35	69.54
GSMUA_Achr11P...	Banana	plastid	66.86	69.07
TraesCS5D01G232400.1	Wheat	cytosol, peroxisome, plastid	69.77	68.38
GSMUA_Achr11P...	Banana	cytosol	66.57	68.36
TraesCS5B01G223700.2	Wheat	cytosol	70.35	67.79
TraesCS7D01G150500.1	Wheat	cytosol	67.15	67.74
HORVU7Hr1G030380.2	Barley	cytosol	66.86	67.45
TraesCS7A01G149000.1	Wheat	cytosol	67.44	67.25
EER89338	Sorghum	cytosol	67.44	67.05
TraesCS7D01G150600.1	Wheat	cytosol	66.57	66.76
Os08t0441500-01	Rice	cytosol, peroxisome, plastid	69.77	66.48
Os09t0419200-01	Rice	cytosol	68.9	66.39
HORVU7Hr1G022220.4	Barley	cytosol	65.12	65.88
Zm00001d045101_P001	Maize	cytosol	65.12	65.88
EES15061	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	70.64	64.97
Zm00001d019669_P001	Maize	cytosol	63.66	64.22
OQU89100	Sorghum	cytosol	63.95	63.58
HORVU0Hr1G013070.1	Barley	cytosol	63.37	63.56
HORVU5Hr1G065330.5	Barley	cytosol, peroxisome, plastid	69.77	63.49
TraesCS7B01G052700.1	Wheat	plastid	66.57	62.06
Os09t0127300-01	Rice	cytosol	61.92	61.38
TraesCS5D01G073300.1	Wheat	cytosol	59.3	60.71
Zm00001d050417_P001	Maize	cytosol	63.95	60.61
TraesCS5B01G069600.1	Wheat	cytosol, mitochondrion, peroxisome	59.01	60.42
TraesCS5A01G061600.1	Wheat	cytosol, mitochondrion, peroxisome	58.72	60.12
HORVU5Hr1G050940.1	Barley	cytosol	62.5	60.06
TraesCS5A01G163400.1	Wheat	cytosol	62.21	59.94
TraesCS5D01G168400.1	Wheat	cytosol	61.63	59.38
Os08t0277200-01	Rice	plastid	59.01	59.36
TraesCS5D01G073400.1	Wheat	cytosol	58.43	59.29
TraesCS5B01G069500.1	Wheat	cytosol	58.43	59.29
TraesCS7B01G052600.1	Wheat	cytosol	67.73	59.29
TraesCS5B01G160700.1	Wheat	cytosol	62.5	58.9
Zm00001d032152_P001	Maize	cytosol	69.77	58.82
TraesCS5A01G061700.1	Wheat	cytosol	57.56	58.41
EES04640	Sorghum	golgi, plastid	55.23	55.39
TraesCS6D01G136600.2	Wheat	extracellular, vacuole	54.94	54.94
Zm00001d015513_P001	Maize	golgi, peroxisome, plastid, vacuole	55.23	54.91
Os02t0180700-01	Rice	extracellular	54.07	54.07
HORVU6Hr1G028980.18	Barley	endoplasmic reticulum, extracellular	53.78	53.62
HORVU5Hr1G016690.3	Barley	cytosol	56.1	53.46
HORVU5Hr1G016620.2	Barley	cytosol	55.81	53.33
AT5G19440.1	Thale cress	plastid	47.67	50.31
TraesCS5A01G061800.1	Wheat	cytosol	40.41	49.82
TraesCS6B01G175600.2	Wheat	plastid	55.23	49.61
AT1G51410.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	46.22	48.92
AT1G66800.1	Thale cress	peroxisome, plasma membrane, plastid	45.06	48.59
AT1G09510.1	Thale cress	cytosol, plastid, vacuole	44.48	47.52
AT1G09490.1	Thale cress	golgi	43.6	46.58
AT1G09500.1	Thale cress	endoplasmic reticulum	42.44	44.92
TraesCS6A01G147300.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	55.23	44.6
AT5G58490.1	Thale cress	cytosol	41.57	44.14
AT2G02400.1	Thale cress	cytosol	39.24	42.45
AT1G09480.1	Thale cress	cytosol	43.9	40.92
AT4G35420.1	Thale cress	extracellular	38.66	40.8
AT1G68540.1	Thale cress	cytosol	37.5	40.19
AT1G25460.1	Thale cress	cytosol, plastid	34.3	36.99
HORVU5Hr1G016670.3	Barley	plastid	1.74	14.29

Protein Annotations

MapMan:21.6.1.5	Gene3D:3.40.50.720	EntrezGene:838165	UniProt:A0A178W9D8	ProteinID:AAF18492.1	ProteinID:AEE29388.1
EMBL:AF320624	EMBL:AF321114	EMBL:AF332459	EMBL:AK228419	ProteinID:ANM59759.1	ProteinID:ANM59762.1
ArrayExpress:AT1G15950	EnsemblPlantsGene:AT1G15950	RefSeq:AT1G15950	TAIR:AT1G15950	RefSeq:AT1G15950-TAIR-G	EnsemblPlants:AT1G15950.1
TAIR:AT1G15950.1	EMBL:AY087316	EMBL:AY743921	Unigene:At.23016	Symbol:CCR1	InterPro:Epimerase_deHydtase
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0006950	GO:GO:0007623	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009409	GO:GO:0009628	GO:GO:0009699	GO:GO:0009809	GO:GO:0009987
GO:GO:0016491	GO:GO:0016621	GO:GO:0019748	GO:GO:0050662	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf
RefSeq:NP_001319013.1	RefSeq:NP_001322097.1	RefSeq:NP_173047.1	ProteinID:OAP13993.1	PFAM:PF01370	PO:PO:0000013
PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PANTHER:PTHR10366
PANTHER:PTHR10366:SF404	UniProt:Q9S9N9	SUPFAM:SSF51735	UniParc:UPI0000048260	SEG:seg	:

Description

CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]

Coordinates

chr1:+:5478603..5482180

Molecular Weight (calculated)

37490.8 Da

IEP (calculated)

6.515

GRAVY (calculated)

-0.260

Length

344 amino acids

Sequence
(BLAST)

001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.