Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 3
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42105 | Canola | cytosol, plastid | 83.39 | 82.87 |
| CDX84989 | Canola | cytosol | 82.76 | 82.24 |
| Bra024747.1-P | Field mustard | extracellular | 59.87 | 80.93 |
| CDY42108 | Canola | cytosol | 58.93 | 80.0 |
| CDX84988 | Canola | cytosol | 74.29 | 77.7 |
| Bra024744.1-P | Field mustard | cytosol | 83.39 | 73.28 |
| AT1G68540.1 | Thale cress | cytosol | 72.73 | 72.27 |
| KRH75363 | Soybean | cytosol | 65.52 | 65.52 |
| VIT_01s0011g03480.t01 | Wine grape | cytosol, plastid | 64.26 | 64.06 |
| Solyc01g068080.2.1 | Tomato | cytosol, extracellular, plastid | 62.38 | 62.19 |
| KRH49476 | Soybean | cytosol | 62.07 | 62.07 |
| PGSC0003DMT400013318 | Potato | cytosol, extracellular, plastid | 62.07 | 61.88 |
| GSMUA_Achr6P09630_001 | Banana | cytosol | 60.19 | 60.0 |
| EES02561 | Sorghum | cytosol | 56.43 | 55.38 |
| TraesCS3A01G046700.1 | Wheat | cytosol | 56.11 | 54.41 |
| TraesCS3B01G036600.1 | Wheat | cytosol | 55.17 | 53.5 |
| TraesCS3D01G033300.1 | Wheat | cytosol | 54.86 | 53.19 |
| Os01t0127500-01 | Rice | cytosol | 54.55 | 51.63 |
| HORVU3Hr1G004270.1 | Barley | mitochondrion | 37.3 | 49.58 |
| AT4G35420.1 | Thale cress | extracellular | 42.95 | 42.02 |
| AT1G09510.1 | Thale cress | cytosol, plastid, vacuole | 37.62 | 37.27 |
| AT1G51410.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 37.93 | 37.23 |
| AT5G19440.1 | Thale cress | plastid | 37.93 | 37.12 |
| AT1G66800.1 | Thale cress | peroxisome, plasma membrane, plastid | 35.74 | 35.74 |
| AT1G15950.1 | Thale cress | cytosol | 36.99 | 34.3 |
| AT1G09490.1 | Thale cress | golgi | 34.48 | 34.16 |
| AT1G80820.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 35.11 | 33.73 |
| AT1G09500.1 | Thale cress | endoplasmic reticulum | 33.23 | 32.62 |
| AT5G58490.1 | Thale cress | cytosol | 32.92 | 32.41 |
| AT1G09480.1 | Thale cress | cytosol | 35.11 | 30.35 |
| AT2G02400.1 | Thale cress | cytosol | 30.09 | 30.19 |
Protein Annotations
| MapMan:21.8.1.5 | Gene3D:3.40.50.720 | EntrezGene:839132 | UniProt:A0A178W577 | ProteinID:AEE30627.2 | ArrayExpress:AT1G25460 |
| EnsemblPlantsGene:AT1G25460 | RefSeq:AT1G25460 | TAIR:AT1G25460 | RefSeq:AT1G25460-TAIR-G | EnsemblPlants:AT1G25460.1 | TAIR:AT1G25460.1 |
| InterPro:Epimerase_deHydtase | UniProt:F4ICH9 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0050662 | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_001319080.1 | ProteinID:OAP13627.1 | PFAM:PF01370 | PO:PO:0000037 |
| PO:PO:0000263 | PO:PO:0009005 | PO:PO:0009025 | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF503 | SUPFAM:SSF51735 |
| UniParc:UPI0007DFCF47 | : | : | : | : | : |
Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:TAIR;Acc:AT1G25460]
Coordinates
chr1:+:8942713..8944442
Molecular Weight (calculated)
35828.1 Da
IEP (calculated)
7.236
GRAVY (calculated)
-0.138
Length
319 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEYLVTGGT SFIASHVIKS LLEFGHYVRT TVRDSDEEKV GFLWDLKGAK ERLKIFEADL TIEGSFDEAV NGVDGVFHIA SRVSVRLDNN NLDKFDPNIS
101: GTMNVMNSCA KSRNTVKRIV LTSSSTAIRY RFDATQVSPL NESHWTDLEY CKHFKIWYAY KKTLGEKEAW RIAADKKLNL VVVIPSFCIG PILSPKPTSS
201: PLIFLSIIKG TRGTYPNFRG GFVHIDDVVA AQILAMEEPK ASGRILCSSS VAHWSEIIEM LRIKYPLYPF ETKCGSEEGK DMPHSLDTTK IHELGFASFK
301: SLTEMFDDCI KCFQDKGLL
101: GTMNVMNSCA KSRNTVKRIV LTSSSTAIRY RFDATQVSPL NESHWTDLEY CKHFKIWYAY KKTLGEKEAW RIAADKKLNL VVVIPSFCIG PILSPKPTSS
201: PLIFLSIIKG TRGTYPNFRG GFVHIDDVVA AQILAMEEPK ASGRILCSSS VAHWSEIIEM LRIKYPLYPF ETKCGSEEGK DMPHSLDTTK IHELGFASFK
301: SLTEMFDDCI KCFQDKGLL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.