Factsheet for HORVU3Hr1G004270.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G046700.1	Wheat	cytosol	86.67	63.22
TraesCS3B01G036600.1	Wheat	cytosol	86.25	62.92
TraesCS3D01G033300.1	Wheat	cytosol	85.42	62.31
EES02561	Sorghum	cytosol	73.33	54.15
Os01t0127500-01	Rice	cytosol	69.58	49.55
CDY42108	Canola	cytosol	42.5	43.4
KRH75363	Soybean	cytosol	55.0	41.38
Bra024747.1-P	Field mustard	extracellular	40.42	41.1
VIT_01s0011g03480.t01	Wine grape	cytosol, plastid	54.58	40.94
Bra004316.1-P	Field mustard	cytosol, nucleus, peroxisome	54.58	40.81
CDX69634	Canola	cytosol	54.58	40.81
CDX96012	Canola	cytosol, nucleus, peroxisome	54.17	40.5
CDY38590	Canola	cytosol	54.17	40.5
AT1G68540.1	Thale cress	cytosol	53.75	40.19
GSMUA_Achr6P09630_001	Banana	cytosol	53.33	40.0
KRH49476	Soybean	cytosol	52.5	39.5
CDY42105	Canola	cytosol, plastid	52.08	38.94
CDX84989	Canola	cytosol	51.25	38.32
Bra008822.1-P	Field mustard	cytosol	43.33	37.82
PGSC0003DMT400013318	Potato	cytosol, extracellular, plastid	50.42	37.81
Solyc01g068080.2.1	Tomato	cytosol, extracellular, plastid	50.0	37.5
AT1G25460.1	Thale cress	cytosol, plastid	49.58	37.3
Bra024744.1-P	Field mustard	cytosol	52.08	34.44
CDX84988	Canola	cytosol	42.08	33.11
HORVU7Hr1G030380.2	Barley	cytosol	36.25	25.51
HORVU0Hr1G013070.1	Barley	cytosol	33.75	23.62
HORVU7Hr1G022220.4	Barley	cytosol	33.33	23.53
HORVU5Hr1G050940.1	Barley	cytosol	33.75	22.63
HORVU6Hr1G028980.18	Barley	endoplasmic reticulum, extracellular	32.08	22.32
HORVU5Hr1G065330.5	Barley	cytosol, peroxisome, plastid	34.58	21.96
HORVU5Hr1G112340.7	Barley	cytosol, plastid	34.17	21.87
HORVU6Hr1G089460.2	Barley	cytosol	30.0	20.17
HORVU5Hr1G122150.1	Barley	plastid	30.0	20.0
HORVU5Hr1G016690.3	Barley	cytosol	30.0	19.94
HORVU3Hr1G088020.2	Barley	cytosol	27.08	19.88
HORVU5Hr1G016620.2	Barley	cytosol	29.58	19.72
HORVU6Hr1G089340.1	Barley	mitochondrion	31.25	19.43
HORVU6Hr1G089350.2	Barley	cytosol, peroxisome	29.58	19.29
HORVU4Hr1G085100.1	Barley	cytosol	28.75	18.55
HORVU5Hr1G016670.3	Barley	plastid	0.83	4.76

Protein Annotations

EnsemblPlants:HORVU3Hr1G004270.1	EnsemblPlantsGene:HORVU3Hr1G004270	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF503	PFAM:PF01370
SEG:seg	SUPFAM:SSF51735	UniParc:UPI000B461BC7	UniProt:A0A287JZ97	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr3H:-:11203518..11204463

Molecular Weight (calculated)

26174.4 Da

IEP (calculated)

7.620

GRAVY (calculated)

-0.160

Length

240 amino acids

Sequence
(BLAST)

001: MRGGARPRLA PTASRDGGTW TSTLPLILVH VASHGGRRTP PILECVRYRH HGGGPPTLNE SHWSDADYCR TYGLWYAYAK TVAEKEAWRL ATEHGLDLVV
101: VNPSFVIGPV LGRAAPTSTA LVVLALLKGD LGKYPNTTIG FVHVDDVVLA HVLAMEDGRA SGRLICSGDV AHWSEVLGAL RERYPQYPIP TECSSGKGDD
201: RAHKMDTSKM EALGFPPFLS IQQMFDDCIK SFQDKGLLLP

Best Arabidopsis Sequence Match ( AT1G68540.2 )
(BLAST)

001: MSSCAKSKAT LKRIVLTSSC SSIRYRFDAT EASPLNESHW SDPEYCKRFN LWYGYAKTLG EREAWRIAEE KGLDLVVVNP SFVVGPLLGP KPTSTLLMIL
101: AIAKGLAGEY PNFTVGFVHI DDVVAAHVLA MEEPKASGRI ICSSSVAHWS EIIELMRNKY PNYPFENKCS NKEGDNSPHS MDTRKIHELG FGSFKSLPEM
201: FDDCIISFQK KGLL

Arabidopsis Description

TKPR2TKPR2 [Source:UniProtKB/TrEMBL;Acc:A0A178W2A9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.