Factsheet for Bra024747.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 3
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42108	Canola	cytosol	89.41	89.79
AT1G25460.1	Thale cress	cytosol, plastid	80.93	59.87
Bra024744.1-P	Field mustard	cytosol	83.47	54.27
Bra004316.1-P	Field mustard	cytosol, nucleus, peroxisome	68.22	50.16
Bra008822.1-P	Field mustard	cytosol	53.81	46.18
KRH75363	Soybean	cytosol	58.9	43.57
VIT_01s0011g03480.t01	Wine grape	cytosol, plastid	58.05	42.81
Solyc01g068080.2.1	Tomato	cytosol, extracellular, plastid	58.05	42.81
PGSC0003DMT400013318	Potato	cytosol, extracellular, plastid	57.2	42.19
KRH49476	Soybean	cytosol	56.78	42.01
GSMUA_Achr6P09630_001	Banana	cytosol	55.51	40.94
HORVU3Hr1G004270.1	Barley	mitochondrion	41.1	40.42
EES02561	Sorghum	cytosol	52.54	38.15
TraesCS3A01G046700.1	Wheat	cytosol	51.69	37.08
TraesCS3B01G036600.1	Wheat	cytosol	51.69	37.08
TraesCS3D01G033300.1	Wheat	cytosol	50.42	36.17
Os01t0127500-01	Rice	cytosol	50.0	35.01
Bra010535.1-P	Field mustard	cytosol	41.53	31.61
Bra030440.1-P	Field mustard	cytosol	36.44	26.46
Bra023231.1-P	Field mustard	cytosol	35.59	25.85
Bra014263.1-P	Field mustard	cytosol	34.75	25.23
Bra002236.1-P	Field mustard	cytosol	34.75	24.85
Bra020020.1-P	Field mustard	extracellular, golgi	32.2	23.6
Bra031666.1-P	Field mustard	golgi	31.36	23.42
Bra002645.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	31.78	23.22
Bra026090.1-P	Field mustard	cytosol	33.47	23.17
Bra020019.1-P	Field mustard	extracellular, golgi	31.78	23.01
Bra026737.1-P	Field mustard	cytosol	33.05	22.74
Bra020021.1-P	Field mustard	golgi	30.93	22.67
Bra038342.1-P	Field mustard	cytosol, golgi, peroxisome	30.93	22.46
Bra026600.1-P	Field mustard	cytosol	30.08	22.12
Bra035150.1-P	Field mustard	cytosol	30.51	21.69
Bra008438.1-P	Field mustard	cytosol	30.08	21.45

Protein Annotations

EnsemblPlants:Bra024747.1	EnsemblPlants:Bra024747.1-P	EnsemblPlantsGene:Bra024747	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF503
PFAM:PF01370	SUPFAM:SSF51735	UniParc:UPI000254272B	UniProt:M4E7J2	MapMan:35.1	:

Description

AT1G25460 (E=3e-071) | oxidoreductase family protein

Coordinates

chrA09:+:23090835..23098200

Molecular Weight (calculated)

26323.7 Da

IEP (calculated)

8.564

GRAVY (calculated)

-0.086

Length

236 amino acids

Sequence
(BLAST)

001: MAEYLVTGGT SFIASHVVKA LLDFGYFEKL ADRDIYGTRN LMNSCEKSRN TVKRIVLTSS STSVRYSYDA TKASPLKGSH WSDLEYFRSF SIWYGYAKTL
101: VEKEAWLIAA EKNLNLVVVI PSFCIGPILS PKPTSSPSIF LSIIKGVHGE YPNFRGGFVH IDDVAAAQIL AMKEPKASGR IICSSSVAHW CGSEEGRDMP
201: HSLDTRKIHE LGFRSFKSLP EMFDDCIKCF KDKGLL

Best Arabidopsis Sequence Match ( AT1G25460.1 )
(BLAST)

001: MAEYLVTGGT SFIASHVIKS LLEFGHYVRT TVRDSDEEKV GFLWDLKGAK ERLKIFEADL TIEGSFDEAV NGVDGVFHIA SRVSVRLDNN NLDKFDPNIS
101: GTMNVMNSCA KSRNTVKRIV LTSSSTAIRY RFDATQVSPL NESHWTDLEY CKHFKIWYAY KKTLGEKEAW RIAADKKLNL VVVIPSFCIG PILSPKPTSS
201: PLIFLSIIKG TRGTYPNFRG GFVHIDDVVA AQILAMEEPK ASGRILCSSS VAHWSEIIEM LRIKYPLYPF ETKCGSEEGK DMPHSLDTTK IHELGFASFK
301: SLTEMFDDCI KCFQDKGLL

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:TAIR;Acc:AT1G25460]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.