Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G036600.1 | Wheat | cytosol | 98.48 | 98.48 |
| TraesCS3A01G046700.1 | Wheat | cytosol | 98.18 | 98.18 |
| HORVU3Hr1G004270.1 | Barley | mitochondrion | 62.31 | 85.42 |
| EES02561 | Sorghum | cytosol | 81.16 | 82.15 |
| Os01t0127500-01 | Rice | cytosol | 78.12 | 76.26 |
| GSMUA_Achr6P09630_001 | Banana | cytosol | 61.7 | 63.44 |
| KRH75363 | Soybean | cytosol | 61.4 | 63.32 |
| Bra008822.1-P | Field mustard | cytosol | 52.89 | 63.27 |
| Bra004316.1-P | Field mustard | cytosol, nucleus, peroxisome | 61.09 | 62.62 |
| CDX69634 | Canola | cytosol | 61.09 | 62.62 |
| KRH49476 | Soybean | cytosol | 60.49 | 62.38 |
| CDX96012 | Canola | cytosol, nucleus, peroxisome | 60.79 | 62.31 |
| CDY38590 | Canola | cytosol | 60.79 | 62.31 |
| AT1G68540.1 | Thale cress | cytosol | 60.49 | 61.99 |
| VIT_01s0011g03480.t01 | Wine grape | cytosol, plastid | 58.97 | 60.62 |
| Solyc01g068080.2.1 | Tomato | cytosol, extracellular, plastid | 58.66 | 60.31 |
| PGSC0003DMT400013318 | Potato | cytosol, extracellular, plastid | 58.36 | 60.0 |
| CDY42105 | Canola | cytosol, plastid | 55.93 | 57.32 |
| CDX84989 | Canola | cytosol | 55.32 | 56.7 |
| AT1G25460.1 | Thale cress | cytosol, plastid | 53.19 | 54.86 |
| CDX84988 | Canola | cytosol | 47.72 | 51.48 |
| Bra024744.1-P | Field mustard | cytosol | 55.93 | 50.69 |
| Bra024747.1-P | Field mustard | extracellular | 36.17 | 50.42 |
| CDY42108 | Canola | cytosol | 34.04 | 47.66 |
| TraesCS5D01G278800.1 | Wheat | mitochondrion | 43.77 | 41.38 |
| TraesCS7D01G248800.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 41.34 | 41.34 |
| TraesCS7D01G150500.1 | Wheat | cytosol | 41.34 | 39.88 |
| TraesCS5D01G486300.2 | Wheat | cytosol | 39.82 | 39.7 |
| TraesCS7D01G150600.1 | Wheat | cytosol | 41.34 | 39.65 |
| TraesCS5D01G232400.1 | Wheat | cytosol, peroxisome, plastid | 41.64 | 39.03 |
| TraesCS5D01G073400.1 | Wheat | cytosol | 40.12 | 38.94 |
| TraesCS5D01G073300.1 | Wheat | cytosol | 39.51 | 38.69 |
| TraesCS5D01G540800.1 | Wheat | plastid | 38.6 | 38.48 |
| TraesCS6D01G365700.1 | Wheat | cytosol | 39.21 | 37.39 |
| TraesCS5D01G541100.1 | Wheat | golgi | 37.39 | 37.27 |
| TraesCS6D01G366200.1 | Wheat | cytosol | 38.6 | 36.81 |
| TraesCS6D01G365900.1 | Wheat | cytosol | 37.39 | 36.39 |
| TraesCS5D01G168400.1 | Wheat | cytosol | 38.91 | 35.85 |
| TraesCS6D01G136600.2 | Wheat | extracellular, vacuole | 37.39 | 35.76 |
| TraesCS4D01G343400.1 | Wheat | cytosol | 36.78 | 35.69 |
| TraesCS3D01G342200.2 | Wheat | cytosol | 36.17 | 34.69 |
| TraesCS6D01G369500.1 | Wheat | peroxisome | 35.87 | 34.5 |
| TraesCS6D01G366000.1 | Wheat | cytosol | 37.99 | 32.47 |
| TraesCS6D01G366400.1 | Wheat | cytosol | 32.83 | 32.43 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G033300.1 | EnsemblPlantsGene:TraesCS3D01G033300 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0050662 | InterPro:Epimerase_deHydtase | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF503 | PFAM:PF01370 |
| SEG:seg | SUPFAM:SSF51735 | TIGR:cd08958 | MapMan:21.8.1.5 | : | : |
Description
No Description!
Coordinates
chr3D:-:12353094..12354155
Molecular Weight (calculated)
35528.4 Da
IEP (calculated)
6.315
GRAVY (calculated)
-0.017
Length
329 amino acids
Sequence
(BLAST)
(BLAST)
001: MPEYCVTGGT GFIASHLIRA LLAAGHTVRA TVRDPSDEAK VGFLWELEGA DERLQLLRAD LLVEGSFDAA VSGVDGVFHA ASPVVVSYED GKDAQEKLVD
101: PIVKGAGNVL RSCARAAVPP RRVVFTSSCS CVRYRHHHVH GGAPPALNES HWSDADYCRT YGLWYAYAKT VAEKEAWRLA TEHGLDLVVV NPSFVVGPVL
201: GRAAATSTAL VVLALLKGDL GKYPNTTIGF VHVDDVVLGH VLAMEDGRAS GRLICSGDVA HWSEVLGSLR ERYPQYPIPT ECSGGKGDDR AHKMDTSKME
301: ALGFPPFLSI QQMFDDCIKS FQEKGLLLP
101: PIVKGAGNVL RSCARAAVPP RRVVFTSSCS CVRYRHHHVH GGAPPALNES HWSDADYCRT YGLWYAYAKT VAEKEAWRLA TEHGLDLVVV NPSFVVGPVL
201: GRAAATSTAL VVLALLKGDL GKYPNTTIGF VHVDDVVLGH VLAMEDGRAS GRLICSGDVA HWSEVLGSLR ERYPQYPIPT ECSGGKGDDR AHKMDTSKME
301: ALGFPPFLSI QQMFDDCIKS FQEKGLLLP
001: MSEYLVTGGT GFIASYIIKS LLELGHTVRT TVRNPRDEEK VGFLWEFQGA KQRLKILQAD LTVEGSFDEA VNGVDGVFHT ASPVLVPQDH NIQETLVDPI
101: IKGTTNVMSS CAKSKATLKR IVLTSSCSSI RYRFDATEAS PLNESHWSDP EYCKRFNLWY GYAKTLGERE AWRIAEEKGL DLVVVNPSFV VGPLLGPKPT
201: STLLMILAIA KGLAGEYPNF TVGFVHIDDV VAAHVLAMEE PKASGRIICS SSVAHWSEII ELMRNKYPNY PFENKCSNKE GDNSPHSMDT RKIHELGFGS
301: FKSLPEMFDD CIISFQKKGL L
101: IKGTTNVMSS CAKSKATLKR IVLTSSCSSI RYRFDATEAS PLNESHWSDP EYCKRFNLWY GYAKTLGERE AWRIAEEKGL DLVVVNPSFV VGPLLGPKPT
201: STLLMILAIA KGLAGEYPNF TVGFVHIDDV VAAHVLAMEE PKASGRIICS SSVAHWSEII ELMRNKYPNY PFENKCSNKE GDNSPHSMDT RKIHELGFGS
301: FKSLPEMFDD CIISFQKKGL L
Arabidopsis Description
TKPR2TKPR2 [Source:UniProtKB/TrEMBL;Acc:A0A178W2A9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.