Factsheet for TraesCS6D01G366400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G365900.1	Wheat	cytosol	83.18	81.95
HORVU6Hr1G089460.2	Barley	cytosol	84.98	79.27
TraesCS6A01G381700.1	Wheat	golgi, mitochondrion	88.29	77.98
TraesCS6D01G365700.1	Wheat	cytosol	75.08	72.46
EES05992	Sorghum	cytosol	71.47	71.9
TraesCS6D01G366200.1	Wheat	cytosol	74.17	71.59
Os02t0808800-01	Rice	cytosol	71.77	70.71
Os02t0811400-00	Rice	cytosol	71.17	70.33
OQU85928	Sorghum	cytosol	71.77	69.68
Os02t0811800-01	Rice	cytosol	67.27	66.08
TraesCS6D01G369500.1	Wheat	peroxisome	67.57	65.79
Zm00001d051938_P002	Maize	cytosol	70.87	63.78
Os02t0811600-00	Rice	cytosol	55.86	63.48
TraesCS6D01G366000.1	Wheat	cytosol	71.47	61.82
TraesCS5D01G232400.1	Wheat	cytosol, peroxisome, plastid	54.95	52.14
TraesCS7D01G150500.1	Wheat	cytosol	52.25	51.03
TraesCS7D01G150600.1	Wheat	cytosol	52.25	50.73
TraesCS5D01G073400.1	Wheat	cytosol	47.75	46.9
TraesCS5D01G168400.1	Wheat	cytosol	49.85	46.5
TraesCS5D01G073300.1	Wheat	cytosol	46.55	46.13
TraesCS6D01G136600.2	Wheat	extracellular, vacuole	46.25	44.77
TraesCS5D01G540800.1	Wheat	plastid	40.84	41.21
TraesCS5D01G541100.1	Wheat	golgi	40.24	40.61
TraesCS4D01G343400.1	Wheat	cytosol	39.64	38.94
TraesCS5D01G486300.2	Wheat	cytosol	38.44	38.79
TraesCS3D01G342200.2	Wheat	cytosol	36.94	35.86
TraesCS5D01G278800.1	Wheat	mitochondrion	37.24	35.63
TraesCS7D01G248800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	34.53	34.95
TraesCS3D01G033300.1	Wheat	cytosol	32.43	32.83

Protein Annotations

EnsemblPlants:TraesCS6D01G366400.1	EnsemblPlantsGene:TraesCS6D01G366400	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF353	PFAM:PF01370
SEG:seg	SUPFAM:SSF51735	TIGR:cd08958	MapMan:21.6.1.5	:	:

Description

No Description!

Coordinates

chr6D:-:454925586..454927015

Molecular Weight (calculated)

36430.7 Da

IEP (calculated)

8.924

GRAVY (calculated)

-0.141

Length

333 amino acids

Sequence
(BLAST)

001: MQSSSKAGGN GDAKHLVCVT GAGSFIGSWV VKELLLRGYR VRGTARDPAH RKNAHLLALD GAGERLTLCR ADVMHGDSLR AAFWGCRGVF HIASPVSNDP
101: ELVPEAVEGT RNVINAAADA GVRRVVFTSS YGAVHMDPNR SPDTVVTTTT TANKPAYNLY CCAKMMAEVA ATEEAARRGL ELAVVVPATT IGPALQQTLN
201: FSSDHVARFL MGAKPAYQNA VTAYVDVRDV ARAHALVYEH PEARSHRYLC VSAVLHRAHF VRLLKDLFPQ YPVTAKCEDD GKPRVREYRF SNQKLGDLGL
301: EFTDMRTSLY ETVICLQHRG HVPVIVPRHR ACL

Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)

001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS

Arabidopsis Description

CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.