Factsheet for TraesCS6D01G365900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G420500.1	Wheat	cytosol	96.75	96.75
TraesCS6D01G366400.1	Wheat	cytosol	81.95	83.18
TraesCS6D01G365700.1	Wheat	cytosol	76.92	75.36
TraesCS6D01G366200.1	Wheat	cytosol	76.04	74.49
EES05992	Sorghum	cytosol	71.3	72.81
Os02t0808800-01	Rice	cytosol	71.6	71.6
Os02t0811400-00	Rice	cytosol	71.01	71.22
TraesCS6D01G369500.1	Wheat	peroxisome	71.6	70.76
OQU85928	Sorghum	cytosol	71.01	69.97
Os02t0811800-01	Rice	cytosol	65.98	65.78
Zm00001d051938_P002	Maize	cytosol	71.3	65.14
TraesCS6D01G366000.1	Wheat	cytosol	73.96	64.94
Os02t0811600-00	Rice	cytosol	53.25	61.43
TraesCS5D01G232400.1	Wheat	cytosol, peroxisome, plastid	54.73	52.71
TraesCS7D01G150500.1	Wheat	cytosol	52.37	51.91
TraesCS7D01G150600.1	Wheat	cytosol	52.66	51.9
TraesCS6D01G136600.2	Wheat	extracellular, vacuole	47.34	46.51
TraesCS5D01G168400.1	Wheat	cytosol	49.11	46.5
TraesCS5D01G073300.1	Wheat	cytosol	46.15	46.43
TraesCS5D01G073400.1	Wheat	cytosol	46.45	46.31
TraesCS5D01G541100.1	Wheat	golgi	41.72	42.73
TraesCS5D01G486300.2	Wheat	cytosol	40.53	41.52
TraesCS5D01G540800.1	Wheat	plastid	39.65	40.61
TraesCS4D01G343400.1	Wheat	cytosol	39.35	39.23
TraesCS3D01G033300.1	Wheat	cytosol	36.39	37.39
TraesCS7D01G248800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	35.5	36.47
TraesCS3D01G342200.2	Wheat	cytosol	36.98	36.44
TraesCS5D01G278800.1	Wheat	mitochondrion	37.28	36.21

Protein Annotations

EnsemblPlants:TraesCS6D01G365900.1	EnsemblPlantsGene:TraesCS6D01G365900	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF353	PFAM:PF01370
SEG:seg	SUPFAM:SSF51735	TIGR:cd08958	MapMan:21.6.1.5	:	:

Description

No Description!

Coordinates

chr6D:+:454734240..454735519

Molecular Weight (calculated)

37222.2 Da

IEP (calculated)

7.747

GRAVY (calculated)

-0.230

Length

338 amino acids

Sequence
(BLAST)

001: MQSSSKAAGG NGDEKHLVCV TGAGSFIGSW VVKELLLRGY RVRGTARDPA DRKNAHLLAL DGAEERLTLC RANVLHYDGL HDVFRGCHGV FHVASPVSND
101: PKLVPTAVEG TRNVINAAAD AGVRRVVFTS SYGAVHMDPN RSPDTVLDES CWSDYDYCKQ TGNLYCCAKM MAEVVATEEA AKRGLELAVV VPAVTIGPSL
201: QQTLNYSTDH VARFLTGAKP AYQNTVTGYI DVRDVARAHA LVYEHPDARG HRYLCVSAVM HRTDFVGLLR DLYPQYPVTA KYEDDGKPTA SPYRFSNQRL
301: RDLGLEFTDM RTSFYDTVIC LQSRGHIPVI VPRQRACL

Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)

001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS

Arabidopsis Description

CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.