Factsheet for TraesCS6B01G420500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G365900.1	Wheat	cytosol	96.75	96.75
EES05992	Sorghum	cytosol	72.19	73.72
TraesCS6B01G420200.1	Wheat	cytosol	74.85	73.33
TraesCS6B01G420000.1	Wheat	cytosol	74.26	72.75
Os02t0808800-01	Rice	cytosol	71.89	71.89
Os02t0811400-00	Rice	cytosol	71.3	71.51
OQU85928	Sorghum	cytosol	72.19	71.14
TraesCS5B01G414300.1	Wheat	cytosol	68.64	69.25
TraesCS6B01G420900.1	Wheat	peroxisome	69.82	68.8
Zm00001d051938_P002	Maize	cytosol	72.19	65.95
Os02t0811800-01	Rice	cytosol	65.98	65.78
TraesCS5B01G414500.1	Wheat	mitochondrion, plastid	68.64	63.74
Os02t0811600-00	Rice	cytosol	52.96	61.09
TraesCS5B01G223700.2	Wheat	cytosol	54.73	51.82
TraesCS7B01G052700.1	Wheat	plastid	52.37	47.97
TraesCS5B01G069500.1	Wheat	cytosol	47.63	47.49
TraesCS5B01G069600.1	Wheat	cytosol, mitochondrion, peroxisome	46.75	47.02
TraesCS7B01G052600.1	Wheat	cytosol	53.25	45.8
TraesCS5B01G160700.1	Wheat	cytosol	49.41	45.75
TraesCS5B01G547200.1	Wheat	unclear	41.72	42.73
TraesCS5B01G486500.1	Wheat	cytosol	41.42	42.42
TraesCS6B01G175600.2	Wheat	plastid	47.34	41.78
TraesCS5B01G547000.1	Wheat	golgi	39.94	40.91
TraesCS3B01G380600.1	Wheat	cytosol	39.05	40.0
TraesCS3B01G380500.1	Wheat	cytosol	37.87	39.14
TraesCS5B01G546700.1	Wheat	peroxisome, plastid	25.74	38.5
TraesCS7B01G141100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	37.28	38.3
TraesCS3B01G036600.1	Wheat	cytosol	36.09	37.08
TraesCS5B01G271500.1	Wheat	mitochondrion	38.17	37.07

Protein Annotations

EnsemblPlants:TraesCS6B01G420500.1	EnsemblPlantsGene:TraesCS6B01G420500	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF353	PFAM:PF01370
SEG:seg	SUPFAM:SSF51735	TIGR:cd08958	MapMan:21.6.1.5	:	:

Description

No Description!

Coordinates

chr6B:-:691793919..691795305

Molecular Weight (calculated)

37202.4 Da

IEP (calculated)

8.259

GRAVY (calculated)

-0.200

Length

338 amino acids

Sequence
(BLAST)

001: MQSSSKAAGG NGDGKHLVCV TGAGSFIGSW VVKELLLRGY RVRGTARDPA DRKNAHLLAL DGAKERLTLC RANVLHYDGL HDVFRGCHGV FHVASPVSND
101: PELVPTAVEG TRNVINAAAD AGVRRVVFTS SYGAVHMDPN RSPDTVLDES CWSDYDYCKQ TGNLYCCAKM MAEVAATEEA AKRGLELAVV VPAVTIGPSL
201: QQTLNYSTDH VARFLMGTKP AYQNTVTGYI DVRDVARAHA LVYEHPDARG HRYLCVSAVL HRIDFVGLLR DLYPQYPVTA KYEDNGKPTV SPYRFSNQRL
301: RDLGLEFTNM RTSFYDTVIC LQSRGHIPVI VPRQRACL

Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)

001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS

Arabidopsis Description

CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.