Factsheet for TraesCS6B01G420200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G420000.1	Wheat	cytosol	92.46	92.46
TraesCS6A01G381400.1	Wheat	cytosol	92.17	92.17
TraesCS6D01G366200.1	Wheat	cytosol	91.3	91.3
HORVU6Hr1G089340.1	Barley	mitochondrion	91.88	82.12
Os02t0808800-01	Rice	cytosol	78.55	80.18
Os02t0811400-00	Rice	cytosol	78.26	80.12
EES05992	Sorghum	cytosol	75.65	78.85
TraesCS6B01G420500.1	Wheat	cytosol	73.33	74.85
OQU85928	Sorghum	cytosol	74.2	74.64
TraesCS6B01G420900.1	Wheat	peroxisome	73.91	74.34
TraesCS5B01G414300.1	Wheat	cytosol	70.72	72.84
Os02t0811800-01	Rice	cytosol	70.72	71.98
Zm00001d051938_P002	Maize	cytosol	75.94	70.81
Os02t0811600-00	Rice	cytosol	56.52	66.55
TraesCS5B01G414500.1	Wheat	mitochondrion, plastid	68.41	64.84
TraesCS5B01G223700.2	Wheat	cytosol	54.49	52.66
TraesCS5B01G069500.1	Wheat	cytosol	51.01	51.92
TraesCS5B01G069600.1	Wheat	cytosol, mitochondrion, peroxisome	50.14	51.49
TraesCS7B01G052700.1	Wheat	plastid	54.2	50.68
TraesCS5B01G160700.1	Wheat	cytosol	51.59	48.77
TraesCS7B01G052600.1	Wheat	cytosol	54.49	47.84
TraesCS6B01G175600.2	Wheat	plastid	48.12	43.34
TraesCS5B01G547200.1	Wheat	unclear	39.71	41.52
TraesCS5B01G486500.1	Wheat	cytosol	38.84	40.61
TraesCS5B01G547000.1	Wheat	golgi	38.55	40.3
TraesCS3B01G380500.1	Wheat	cytosol	37.68	39.76
TraesCS3B01G380600.1	Wheat	cytosol	36.81	38.48
TraesCS3B01G036600.1	Wheat	cytosol	36.52	38.3
TraesCS5B01G546700.1	Wheat	peroxisome, plastid	24.64	37.61
TraesCS7B01G141100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	35.07	36.78
TraesCS5B01G271500.1	Wheat	mitochondrion	36.52	36.21

Protein Annotations

EnsemblPlants:TraesCS6B01G420200.1	EnsemblPlantsGene:TraesCS6B01G420200	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF353	PFAM:PF01370
SEG:seg	SUPFAM:SSF51735	TIGR:cd08958	MapMan:21.6.1.5	:	:

Description

No Description!

Coordinates

chr6B:-:691782272..691783993

Molecular Weight (calculated)

38140.9 Da

IEP (calculated)

7.925

GRAVY (calculated)

-0.179

Length

345 amino acids

Sequence
(BLAST)

001: MPSIDKATDN GELKQRQPEQ ELVCVTGAGG FIGSWVVKEL LLRGYRVRGT ARDPADRKNA HLLAVEGAEE RLTLCRADVL DYNGLRAAFR GCHGVFHVAS
101: PVSNDPDLVP VAVEGTRNVI RAAADAGVQR VVFTSSYGAV HMDPNRSPDV VLDETCWSDY EYCKNTGNLY CCAKMMAEIT AAEEAAKRGL ELAVVVPSMT
201: MGPMLQQSLN FSSSHVARYL TGAKPTYPNA VAAYTDVRDV ARAHVLVYEH PNAHGRYLCI GAVLHRAYFL ELLGDLFPQY HITAKCEDDG KPMAKPYKFS
301: NLRLRELGLE FTPLRQSLYE TVTCLQKKGH LRLPIVPIAQ KRAYL

Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)

001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS

Arabidopsis Description

CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.