Factsheet for TraesCS5B01G414500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G410400.1	Wheat	cytosol	83.24	89.64
TraesCS5B01G414300.1	Wheat	cytosol	80.77	87.76
Os02t0808800-01	Rice	cytosol	68.13	73.37
Os02t0811400-00	Rice	cytosol	67.03	72.4
EES05992	Sorghum	cytosol	63.46	69.79
TraesCS6B01G420500.1	Wheat	cytosol	63.74	68.64
TraesCS6B01G420200.1	Wheat	cytosol	64.84	68.41
OQU85928	Sorghum	cytosol	63.19	67.06
Os02t0811800-01	Rice	cytosol	62.09	66.67
TraesCS6B01G420000.1	Wheat	cytosol	63.19	66.67
TraesCS6B01G420900.1	Wheat	peroxisome	60.44	64.14
Zm00001d051938_P002	Maize	cytosol	64.29	63.24
Os02t0811600-00	Rice	cytosol	49.45	61.43
TraesCS5B01G223700.2	Wheat	cytosol	46.7	47.62
TraesCS5B01G069600.1	Wheat	cytosol, mitochondrion, peroxisome	43.41	47.02
TraesCS7B01G052700.1	Wheat	plastid	46.43	45.8
TraesCS5B01G069500.1	Wheat	cytosol	42.58	45.72
TraesCS5B01G160700.1	Wheat	cytosol	44.51	44.38
TraesCS7B01G052600.1	Wheat	cytosol	46.7	43.26
TraesCS6B01G175600.2	Wheat	plastid	44.78	42.56
TraesCS3B01G380500.1	Wheat	cytosol	34.62	38.53
TraesCS3B01G380600.1	Wheat	cytosol	34.89	38.48
TraesCS5B01G547200.1	Wheat	unclear	34.62	38.18
TraesCS7B01G141100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	34.07	37.69
TraesCS5B01G547000.1	Wheat	golgi	33.79	37.27
TraesCS5B01G486500.1	Wheat	cytosol	33.52	36.97
TraesCS3B01G036600.1	Wheat	cytosol	32.69	36.17
TraesCS5B01G271500.1	Wheat	mitochondrion	34.34	35.92
TraesCS5B01G546700.1	Wheat	peroxisome, plastid	19.78	31.86

Protein Annotations

EnsemblPlants:TraesCS5B01G414500.1	EnsemblPlantsGene:TraesCS5B01G414500	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF353	PFAM:PF01370
SUPFAM:SSF51735	TIGR:cd08958	MapMan:21.6.1.5	:	:	:

Description

No Description!

Coordinates

chr5B:+:588832720..588834700

Molecular Weight (calculated)

40812.3 Da

IEP (calculated)

9.487

GRAVY (calculated)

-0.289

Length

364 amino acids

Sequence
(BLAST)

001: MSLHYKYTAT HKDCLCSGKR TNLVSQYSMA NNSSAEKQRA RVLVCVTGAG GFIGSRVVKE LLLRGYRVRG TARDPADRKN VHLQTLEGAN ERLSLHRADV
101: LDCDSLRAAF DGCHGVFHVA SPVSNDVELM PVAVKGTRNV VNAAADMGVH RLVFTSSYGA VHMNPNRSPD TVLDETCWSD YEFCKQTGNY YCCAKMMADK
201: AATEEAARRG LQLAVVVPPM TIGPMLQRSL NGSNYYVARY LMGTKKAYPN AVAIYADIRD VVRAHLLVYE HHRARGRYVC FGTALHRSCL LRLLRGLFPH
301: YPITSKCEGN DKPMVRPYRF SNQRLKDLGL EFTDDMRKTL YETVICLQQK GHVRLIMPNQ HSSL

Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)

001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS

Arabidopsis Description

CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.