Factsheet for TraesCS7B01G052600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G150500.1	Wheat	cytosol	84.99	97.95
TraesCS7A01G149000.1	Wheat	cytosol	84.99	96.81
TraesCS7D01G150600.1	Wheat	cytosol	83.46	95.63
HORVU7Hr1G030380.2	Barley	cytosol	82.95	95.6
TraesCS7B01G052700.1	Wheat	plastid	82.7	88.08
Zm00001d045101_P001	Maize	cytosol	72.01	83.24
EER89338	Sorghum	cytosol	71.5	81.21
GSMUA_Achr5P04460_001	Banana	cytosol, peroxisome, plastid	61.83	72.32
TraesCS5B01G223700.2	Wheat	cytosol	65.65	72.27
VIT_09s0070g00240.t01	Wine grape	cytosol	62.09	72.19
CDY35052	Canola	cytosol	50.64	72.1
PGSC0003DMT400051049	Potato	endoplasmic reticulum, peroxisome, plastid	59.8	70.78
GSMUA_Achr11P...	Banana	cytosol	60.31	70.75
PGSC0003DMT400073398	Potato	cytosol, endoplasmic reticulum, mitochondrion, plastid	59.29	70.18
Solyc03g116910.2.1	Tomato	endoplasmic reticulum, peroxisome, plastid	59.29	70.18
CDX81743	Canola	cytosol	60.56	70.0
Solyc06g068440.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plastid	58.78	69.58
Bra026090.1-P	Field mustard	cytosol	59.8	68.92
Bra026737.1-P	Field mustard	cytosol	60.05	68.8
CDY52857	Canola	cytosol	60.05	68.8
CDY33365	Canola	cytosol	59.8	68.51
KRH47350	Soybean	cytosol	57.51	68.07
KRH44552	Soybean	cytosol	57.51	67.87
KRH09656	Soybean	cytosol	58.02	67.86
AT1G15950.1	Thale cress	cytosol	59.29	67.73
CDY63972	Canola	cytosol	56.74	67.37
CDX87345	Canola	cytosol	56.23	66.57
Bra035150.1-P	Field mustard	cytosol	56.23	66.57
Bra008438.1-P	Field mustard	cytosol	55.98	66.47
CDY64860	Canola	cytosol	55.98	66.47
AT1G80820.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	55.98	66.27
CDY39941	Canola	cytosol	55.98	66.27
KRH23636	Soybean	cytosol	56.49	65.68
TraesCS5B01G069600.1	Wheat	cytosol, mitochondrion, peroxisome	53.44	62.5
TraesCS5B01G069500.1	Wheat	cytosol	53.44	61.95
TraesCS5B01G160700.1	Wheat	cytosol	53.69	57.81
TraesCS6B01G420900.1	Wheat	peroxisome	48.85	55.98
TraesCS6B01G420000.1	Wheat	cytosol	48.35	55.07
TraesCS6B01G420200.1	Wheat	cytosol	47.84	54.49
TraesCS6B01G420500.1	Wheat	cytosol	45.8	53.25
TraesCS5B01G414300.1	Wheat	cytosol	44.27	51.94
TraesCS6B01G175600.2	Wheat	plastid	49.87	51.17
TraesCS5B01G414500.1	Wheat	mitochondrion, plastid	43.26	46.7
TraesCS5B01G547200.1	Wheat	unclear	37.15	44.24
TraesCS5B01G486500.1	Wheat	cytosol	36.13	43.03
TraesCS5B01G547000.1	Wheat	golgi	35.88	42.73
TraesCS7B01G141100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	34.86	41.64
TraesCS3B01G380500.1	Wheat	cytosol	34.61	41.59
TraesCS3B01G036600.1	Wheat	cytosol	34.61	41.34
TraesCS3B01G380600.1	Wheat	cytosol	33.84	40.3
TraesCS5B01G546700.1	Wheat	peroxisome, plastid	22.9	39.82
TraesCS5B01G271500.1	Wheat	mitochondrion	33.33	37.64

Protein Annotations

EnsemblPlants:TraesCS7B01G052600.1	EnsemblPlantsGene:TraesCS7B01G052600	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF404	PFAM:PF01370
SEG:seg	SUPFAM:SSF51735	TIGR:cd08958	MapMan:21.6.1.5	:	:

Description

No Description!

Coordinates

chr7B:-:55034014..55035889

Molecular Weight (calculated)

41965.7 Da

IEP (calculated)

6.498

GRAVY (calculated)

-0.063

Length

393 amino acids

Sequence
(BLAST)

001: MTVGGEATPT PTGHGQTVCV TGAGGYIGSW IVKLLLEKGY AVRGTVRNPD DAKNAHLRGL AGAAERLVLC KADLLDGDAL RAAIAGCHGV FHTASPVTDD
101: PEEMVEPAVR GTRYVIDAAA ESGTVRRVVL TSSIGAVAMD PSRAPDAVVD ESCWSDLEFC KKTKNWYCYG KTVAEREAWE AATARGLDLV VVNPVLVQGP
201: ALQPAVNASL THVLKYLDGS AKTFANAVQA YVHVRDTAAA HVLVFESPAA AGRYLCVADG AVLHREDVVT ILRKFFPEYP IPSRCSDEVN PRKQPYKMSN
301: QRLRELGLEF TPVAQCLYDT VVSFQEKGVL PGPPAPAQPA VREINSESSS SSPFSNSEAS MQYCIHGWVK ISSYVSACHS GACSCCSNSL SYN

Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)

001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS

Arabidopsis Description

CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.