Factsheet for TraesCS5B01G223700.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G232400.1	Wheat	cytosol, peroxisome, plastid	95.52	97.15
TraesCS5A01G225100.3	Wheat	cytosol, plastid	94.68	97.13
HORVU5Hr1G065330.5	Barley	cytosol, peroxisome, plastid	94.68	89.42
Os09t0419200-01	Rice	cytosol	87.11	87.11
HORVU0Hr1G013070.1	Barley	cytosol	82.91	86.3
GSMUA_Achr5P04460_001	Banana	cytosol, peroxisome, plastid	73.67	78.27
GSMUA_Achr11P...	Banana	cytosol	72.83	77.61
CDY35052	Canola	cytosol	58.82	76.09
VIT_09s0070g00240.t01	Wine grape	cytosol	70.03	73.96
CDX81743	Canola	cytosol	68.63	72.06
CDY52857	Canola	cytosol	69.19	72.01
Bra026737.1-P	Field mustard	cytosol	69.19	72.01
PGSC0003DMT400051049	Potato	endoplasmic reticulum, peroxisome, plastid	66.95	71.99
Bra026090.1-P	Field mustard	cytosol	68.35	71.55
CDY33365	Canola	cytosol	68.63	71.43
PGSC0003DMT400073398	Potato	cytosol, endoplasmic reticulum, mitochondrion, plastid	66.39	71.39
Solyc03g116910.2.1	Tomato	endoplasmic reticulum, peroxisome, plastid	66.11	71.08
KRH09656	Soybean	cytosol	66.67	70.83
Solyc06g068440.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plastid	65.83	70.78
AT1G15950.1	Thale cress	cytosol	67.79	70.35
KRH47350	Soybean	cytosol	65.27	70.18
KRH44552	Soybean	cytosol	64.99	69.67
TraesCS7B01G052700.1	Wheat	plastid	71.99	69.65
CDY63972	Canola	cytosol	63.87	68.88
AT1G80820.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	63.87	68.67
Bra035150.1-P	Field mustard	cytosol	63.87	68.67
CDX87345	Canola	cytosol	63.87	68.67
CDY64860	Canola	cytosol	63.59	68.58
Bra008438.1-P	Field mustard	cytosol	63.59	68.58
CDY39941	Canola	cytosol	63.59	68.37
KRH23636	Soybean	cytosol	64.43	68.05
TraesCS7B01G052600.1	Wheat	cytosol	72.27	65.65
TraesCS5B01G069600.1	Wheat	cytosol, mitochondrion, peroxisome	57.7	61.31
TraesCS5B01G160700.1	Wheat	cytosol	62.18	60.82
TraesCS5B01G069500.1	Wheat	cytosol	57.7	60.77
TraesCS6B01G420900.1	Wheat	peroxisome	53.22	55.39
TraesCS6B01G420000.1	Wheat	cytosol	52.94	54.78
TraesCS6B01G420500.1	Wheat	cytosol	51.82	54.73
TraesCS6B01G420200.1	Wheat	cytosol	52.66	54.49
TraesCS6B01G175600.2	Wheat	plastid	56.58	52.74
TraesCS5B01G414300.1	Wheat	cytosol	49.02	52.24
TraesCS5B01G547200.1	Wheat	unclear	44.54	48.18
TraesCS5B01G547000.1	Wheat	golgi	43.42	46.97
TraesCS5B01G414500.1	Wheat	mitochondrion, plastid	47.62	46.7
TraesCS5B01G486500.1	Wheat	cytosol	41.18	44.55
TraesCS3B01G380500.1	Wheat	cytosol	40.06	43.73
TraesCS3B01G380600.1	Wheat	cytosol	39.78	43.03
TraesCS5B01G546700.1	Wheat	peroxisome, plastid	26.89	42.48
TraesCS3B01G036600.1	Wheat	cytosol	38.1	41.34
TraesCS7B01G141100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	37.25	40.43
TraesCS5B01G271500.1	Wheat	mitochondrion	38.38	39.37

Protein Annotations

EnsemblPlants:TraesCS5B01G223700.2	EnsemblPlantsGene:TraesCS5B01G223700	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF404	PFAM:PF01370
SEG:seg	SUPFAM:SSF51735	TIGR:cd08958	MapMan:21.6.1.5	:	:

Description

No Description!

Coordinates

chr5B:+:398346143..398350041

Molecular Weight (calculated)

38640.1 Da

IEP (calculated)

6.182

GRAVY (calculated)

-0.106

Length

357 amino acids

Sequence
(BLAST)

001: MTVVDAAAVA QELPGHGQTV CVTGAAGYIA SWLVKLLLER GYTVKGTVRN PGTRTIEIQV HNDPKNAHLK ALDGAAERLI LCKADLLDYD AICAAVEGCH
101: GVFHTASPVT DDPEQMVEPA VRGTEYVINA AADAGTVRRV VFTSSIGAVT MDPNRGPDVV VDESCWSDLE FCKKTKNWYC YGKAVAEQAA WEKAGARGVD
201: LVVVNPVLVV GPLLQPTVNA SAAHILKYLD GSAKKYANAV QAYVDVRDVA AAHVRVFEAP EASGRYLCAE RVLHREDVVH ILAKLFPEYP VPTRCSDEVN
301: PRKQPYKMSN QKLQDLGLQF TPVNDSLYET VKSLQEKGHL PAPRKDILPA ELDGATA

Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)

001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS

Arabidopsis Description

CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.