Factsheet for TraesCS5A01G225100.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G232400.1	Wheat	cytosol, peroxisome, plastid	99.14	98.29
TraesCS5B01G223700.2	Wheat	cytosol	97.13	94.68
Os09t0419200-01	Rice	cytosol	90.52	88.24
HORVU5Hr1G065330.5	Barley	cytosol, peroxisome, plastid	95.11	87.57
HORVU0Hr1G013070.1	Barley	cytosol	84.77	86.01
GSMUA_Achr11P...	Banana	cytosol	75.29	78.21
GSMUA_Achr5P04460_001	Banana	cytosol, peroxisome, plastid	75.29	77.98
TraesCS7A01G149000.1	Wheat	cytosol	75.29	75.94
CDY35052	Canola	cytosol	60.06	75.72
VIT_09s0070g00240.t01	Wine grape	cytosol	71.55	73.67
CDX81743	Canola	cytosol	70.11	71.76
CDY52857	Canola	cytosol	70.69	71.72
Bra026737.1-P	Field mustard	cytosol	70.69	71.72
PGSC0003DMT400073398	Potato	cytosol, endoplasmic reticulum, mitochondrion, plastid	68.1	71.39
Bra026090.1-P	Field mustard	cytosol	69.83	71.26
CDY33365	Canola	cytosol	70.11	71.14
PGSC0003DMT400051049	Potato	endoplasmic reticulum, peroxisome, plastid	67.82	71.08
Solyc06g068440.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plastid	67.53	70.78
AT1G15950.1	Thale cress	cytosol	69.54	70.35
KRH09656	Soybean	cytosol	67.82	70.24
Solyc03g116910.2.1	Tomato	endoplasmic reticulum, peroxisome, plastid	66.95	70.18
KRH47350	Soybean	cytosol	66.67	69.88
KRH44552	Soybean	cytosol	66.09	69.07
CDY63972	Canola	cytosol	65.23	68.58
AT1G80820.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	65.23	68.37
Bra035150.1-P	Field mustard	cytosol	65.23	68.37
CDX87345	Canola	cytosol	65.23	68.37
CDY64860	Canola	cytosol	64.94	68.28
Bra008438.1-P	Field mustard	cytosol	64.94	68.28
CDY39941	Canola	cytosol	64.94	68.07
KRH23636	Soybean	cytosol	65.52	67.46
TraesCS5A01G163400.1	Wheat	cytosol	64.37	62.75
TraesCS5A01G061600.1	Wheat	cytosol, mitochondrion, peroxisome	58.62	60.71
TraesCS5A01G061700.1	Wheat	cytosol	58.91	60.47
TraesCS6A01G381400.1	Wheat	cytosol	54.6	55.07
TraesCS6A01G380800.1	Wheat	cytosol	53.45	54.71
TraesCS5A01G410400.1	Wheat	cytosol	51.15	52.66
TraesCS4A01G331600.1	Wheat	cytosol, golgi, plastid	32.18	51.38
TraesCS5A01G061800.1	Wheat	cytosol	40.52	50.54
TraesCS5A01G410100.1	Wheat	cytosol	48.56	50.45
TraesCS6A01G381100.1	Wheat	cytosol	39.37	49.1
TraesCS6A01G381700.1	Wheat	golgi, mitochondrion	52.59	48.54
TraesCS4A01G331900.2	Wheat	golgi, unclear	45.11	47.58
TraesCS6A01G380900.1	Wheat	cytosol	51.72	46.88
TraesCS6A01G147300.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	56.9	46.48
TraesCS5A01G473600.1	Wheat	cytosol	42.53	44.85
TraesCS3A01G348600.1	Wheat	cytosol	40.8	43.29
TraesCS5A01G517000.1	Wheat	mitochondrion	43.39	41.83
TraesCS3A01G046700.1	Wheat	cytosol	38.79	41.03
TraesCS5A01G271200.1	Wheat	mitochondrion	39.37	39.37
TraesCS7A01G250100.1	Wheat	cytosol, mitochondrion, plastid	37.36	34.57

Protein Annotations

EnsemblPlants:TraesCS5A01G225100.3	EnsemblPlantsGene:TraesCS5A01G225100	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF404	PFAM:PF01370
SEG:seg	SUPFAM:SSF51735	TIGR:cd08958	MapMan:21.6.1.5	:	:

Description

No Description!

Coordinates

chr5A:+:440262022..440265674

Molecular Weight (calculated)

37462.7 Da

IEP (calculated)

6.346

GRAVY (calculated)

-0.078

Length

348 amino acids

Sequence
(BLAST)

001: MTVVAAAAAA QELPGHGQTV CVTGAAGYIA SWLVKLLLER GYTVKGTVRN PDDPKNAHLR ALDGAAERLV LCKADLLDYD AICAAVEGCH GVFHTASPVT
101: DDPEQMVEPA VRGTEYVINA AADAGTVRRV VFTSSIGAVT MDPNRGPDVV VDESCWSDLE FCKKTKNWYC YGKAVAEQAA WEKAAARGVD LVVVNPVLVV
201: GPLLQPTVNA SAAHILKYLD GSAKKYANAV QAYVDVRDVA AAHVRVFEAP GASGRHLCAE RVLHREDVVH ILGKLFPEYP VPTRCSDEVN PRKQPYKMSN
301: QKLQDLGLQF TPVNDSLYET VKSLQEKGHL PAPRKDIILP AELDGATA

Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)

001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS

Arabidopsis Description

CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.