Factsheet for TraesCS6A01G381100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G365700.1	Wheat	cytosol	84.95	68.7
TraesCS6B01G420000.1	Wheat	cytosol	84.95	68.7
TraesCS6A01G381400.1	Wheat	cytosol	84.23	68.12
TraesCS6D01G366000.1	Wheat	cytosol	84.95	61.56
HORVU6Hr1G089340.1	Barley	mitochondrion	83.87	60.62
Os02t0811400-00	Rice	cytosol	72.04	59.64
Os02t0808800-01	Rice	cytosol	71.68	59.17
EES05992	Sorghum	cytosol	68.1	57.4
TraesCS6A01G380800.1	Wheat	cytosol	69.53	57.06
TraesCS6A01G380900.1	Wheat	cytosol	78.14	56.77
OQU85928	Sorghum	cytosol	65.95	53.64
Os02t0811800-01	Rice	cytosol	64.52	53.1
TraesCS5A01G410400.1	Wheat	cytosol	63.8	52.66
TraesCS5A01G410100.1	Wheat	cytosol	62.72	52.24
Zm00001d051938_P002	Maize	cytosol	67.03	50.54
TraesCS6A01G381700.1	Wheat	golgi, mitochondrion	67.38	49.87
Os02t0811600-00	Rice	cytosol	49.46	47.1
TraesCS7A01G149000.1	Wheat	cytosol	49.46	40.0
TraesCS5A01G225100.3	Wheat	cytosol, plastid	49.1	39.37
TraesCS5A01G061700.1	Wheat	cytosol	47.67	39.23
TraesCS5A01G061600.1	Wheat	cytosol, mitochondrion, peroxisome	46.24	38.39
TraesCS4A01G331600.1	Wheat	cytosol, golgi, plastid	29.39	37.61
TraesCS5A01G163400.1	Wheat	cytosol	47.67	37.25
TraesCS5A01G061800.1	Wheat	cytosol	31.9	31.9
TraesCS5A01G473600.1	Wheat	cytosol	37.63	31.82
TraesCS3A01G046700.1	Wheat	cytosol	35.84	30.4
TraesCS4A01G331900.2	Wheat	golgi, unclear	35.84	30.3
TraesCS6A01G147300.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	45.16	29.58
TraesCS3A01G348600.1	Wheat	cytosol	34.77	29.57
TraesCS5A01G271200.1	Wheat	mitochondrion	36.2	29.02
TraesCS5A01G517000.1	Wheat	mitochondrion	36.92	28.53
TraesCS7A01G250100.1	Wheat	cytosol, mitochondrion, plastid	35.48	26.33

Protein Annotations

EnsemblPlants:TraesCS6A01G381100.1	EnsemblPlantsGene:TraesCS6A01G381100	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF353	PFAM:PF01370
SUPFAM:SSF51735	TIGR:cd08958	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr6A:-:601031899..601033113

Molecular Weight (calculated)

30804.9 Da

IEP (calculated)

6.594

GRAVY (calculated)

-0.059

Length

279 amino acids

Sequence
(BLAST)

001: MPSIANASDN GELKQRQPEQ ELVCVTGGGG FIGSWVVKEL LLRGYRVRGT ARDPAYLMAR AFALVCEADR KNAHLLALEG AEERLTFFRA DDLVPVAVEA
101: TRNVIRAAAD AGVHRVVFTS SYGAVHMDPN RGPDAVLDET CWSDYEYCKN TGNLYCCAKM MTEITATEEA AKRGLELAVV VPSMTMGPML QQALNFSSSH
201: VARYLTGAKP TYPNAIAAYT DVRDVARAHV LVYEHPDAHG RYLCIGAVLY RAHFLQLLGD LFLQYHITAK YERNTIDLI

Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)

001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS

Arabidopsis Description

CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.