Factsheet for TraesCS7A01G250100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

mitochondrion 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G182300.1
TraesCS4B01G136100.2
TraesCS4D01G130900.1
TraesCS5A01G153500.1
TraesCS5B01G152300.1
TraesCS5D01G158800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G35420.1	TraesCS4A01G182300.1	AT3G08530.1	21798944
AT4G35420.1	TraesCS4B01G136100.2	AT3G08530.1	21798944
AT4G35420.1	TraesCS4D01G130900.1	AT3G08530.1	21798944
AT4G35420.1	TraesCS5A01G153500.1	AT3G08530.1	21798944
AT4G35420.1	TraesCS5B01G152300.1	AT3G08530.1	21798944
AT4G35420.1	TraesCS5D01G158800.1	AT3G08530.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G141100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	86.44	98.78
TraesCS7D01G248800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	86.17	98.48
Os08t0515900-01	Rice	cytosol	63.56	81.02
EES14250	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	69.95	78.51
TraesCS5A01G271200.1	Wheat	mitochondrion	61.44	66.38
VIT_03s0038g04220.t01	Wine grape	endoplasmic reticulum	56.38	65.63
CDY24810	Canola	cytosol	54.26	64.35
GSMUA_AchrUn_...	Banana	cytosol	55.32	64.0
CDX75502	Canola	cytosol, extracellular, plastid	54.26	63.95
Bra010535.1-P	Field mustard	cytosol	52.39	63.55
CDX69139	Canola	cytosol, extracellular, plastid	53.46	63.01
CDY41656	Canola	cytosol, plastid, vacuole	52.93	62.78
AT4G35420.1	Thale cress	extracellular	54.26	62.58
PGSC0003DMT400065107	Potato	cytosol	55.32	62.09
Solyc04g008780.2.1	Tomato	cytosol	55.05	61.24
KRH23414	Soybean	mitochondrion	51.6	58.61
KRH09917	Soybean	mitochondrion	51.33	58.13
Zm00001d031488_P002	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	52.13	57.14
VIT_03s0038g04230.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	36.97	55.38
TraesCS4A01G331600.1	Wheat	cytosol, golgi, plastid	28.72	49.54
TraesCS4A01G331900.2	Wheat	golgi, unclear	38.3	43.64
TraesCS3A01G046700.1	Wheat	cytosol	36.44	41.64
TraesCS5A01G517000.1	Wheat	mitochondrion	39.63	41.27
TraesCS7A01G149000.1	Wheat	cytosol	35.9	39.13
TraesCS6A01G380800.1	Wheat	cytosol	35.11	38.82
TraesCS5A01G061700.1	Wheat	cytosol	34.84	38.64
TraesCS5A01G061600.1	Wheat	cytosol, mitochondrion, peroxisome	34.31	38.39
TraesCS5A01G225100.3	Wheat	cytosol, plastid	34.57	37.36
TraesCS5A01G163400.1	Wheat	cytosol	34.84	36.69
TraesCS5A01G410100.1	Wheat	cytosol	32.45	36.42
TraesCS5A01G410400.1	Wheat	cytosol	32.71	36.39
TraesCS6A01G381100.1	Wheat	cytosol	26.33	35.48
TraesCS6A01G381400.1	Wheat	cytosol	32.45	35.36
TraesCS5A01G473600.1	Wheat	cytosol	30.59	34.85
TraesCS3A01G348600.1	Wheat	cytosol	29.79	34.15
TraesCS6A01G381700.1	Wheat	golgi, mitochondrion	31.65	31.57
TraesCS5A01G061800.1	Wheat	cytosol	23.14	31.18
TraesCS6A01G380900.1	Wheat	cytosol	30.85	30.21
TraesCS6A01G147300.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	33.51	29.58

Protein Annotations

MapMan:21.8.1.5	Gene3D:3.40.50.720	InterPro:Epimerase_deHydtase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009555	GO:GO:0009653
GO:GO:0009987	GO:GO:0016043	GO:GO:0050662	GO:GO:0080110	InterPro:NAD(P)-bd_dom_sf	PFAM:PF01370
PANTHER:PTHR10366	PANTHER:PTHR10366:SF493	SUPFAM:SSF51735	InterPro:TKPR1	EnsemblPlantsGene:TraesCS7A01G250100	EnsemblPlants:TraesCS7A01G250100.1
TIGR:cd08958	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7A:-:232592182..232598145

Molecular Weight (calculated)

41406.6 Da

IEP (calculated)

5.502

GRAVY (calculated)

-0.087

Length

376 amino acids

Sequence
(BLAST)

001: MFSWAFKMRS CVMYYDQALE RGSCEPPNLL STCRTESPKG GDIPLQRMAN TSKGKVCVTG ASGFVASWLV KRLLESGYHV LGTVRDPGNQ KKVAHLWNLA
101: GAKEGLELVR ADLLEEGSFD DAVMACEGVF HTASPIITNA DSKEEMLDSA INGTLNVLRS CKKNPFLKRV VLTSSSSTVR LRDEAEFPPN VLLDETSWSS
201: VEFCESIQIW YAVAKILAEK SAWEFAKENN IDLVAVLPTF VIGPNLSPVL GPTASDVLGL FKGETEKFTI FGRMGYVHID DVASCHILVY ETADAKGRYI
301: CNSAVLDSNE LVALLAKRFP SFPIPKSLPN IYGEQTYGYN TSKIRKLGLE FRGVEEMFDD SVESLKAHGY LREGAA

Best Arabidopsis Sequence Match ( AT4G35420.1 )
(BLAST)

001: MDQAKGKVCV TGASGFLASW LVKRLLLEGY EVIGTVRDPG NEKKLAHLWK LEGAKERLRL VKADLMEEGS FDNAIMGCQG VFHTASPVLK PTSNPEEEIL
101: RPAIEGTLNV LRSCRKNPSL KRVVLTSSSS TVRIRDDFDP KIPLDESIWT SVELCKRFQV WYALSKTLAE QAAWKFSEEN GIDLVTVLPS FLVGPSLPPD
201: LCSTASDVLG LLKGETEKFQ WHGQMGYVHI DDVARTHIVV FEHEAAQGRY ICSSNVISLE ELVSFLSARY PSLPIPKRFE KLNRLHYDFD TSKIQSLGLK
301: FKSLEEMFDD CIASLVEQGY LSTVLP

Arabidopsis Description

TKPR1Tetraketide alpha-pyrone reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q500U8]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.