CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, cytosol, plasma membrane, golgi

Predictor Summary:

cytosol 2
plastid 2
mitochondrion 3
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid, secretory
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	golgi
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EES07849
KXG22761

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G35420.1	EES07849	AT3G08530.1	21798944
AT4G35420.1	KXG22761	AT3G08530.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G248800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	78.81	80.24
Os08t0515900-01	Rice	cytosol	70.45	80.0
TraesCS7B01G141100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	78.51	79.94
TraesCS7A01G250100.1	Wheat	cytosol, mitochondrion, plastid	78.51	69.95
EER99113	Sorghum	mitochondrion	68.66	69.91
VIT_03s0038g04220.t01	Wine grape	endoplasmic reticulum	62.69	65.02
GSMUA_AchrUn_...	Banana	cytosol	61.19	63.08
Zm00001d031488_P002	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	63.28	61.81
CDY24810	Canola	cytosol	58.21	61.51
CDY41656	Canola	cytosol, plastid, vacuole	58.21	61.51
AT4G35420.1	Thale cress	extracellular	59.7	61.35
CDX69139	Canola	cytosol, extracellular, plastid	58.21	61.13
CDX75502	Canola	cytosol, extracellular, plastid	58.21	61.13
Bra010535.1-P	Field mustard	cytosol	56.12	60.65
PGSC0003DMT400065107	Potato	cytosol	60.0	60.0
Solyc04g008780.2.1	Tomato	cytosol	60.3	59.76
KRH23414	Soybean	mitochondrion	58.81	59.52
KRH09917	Soybean	mitochondrion	58.81	59.34
VIT_03s0038g04230.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	39.4	52.59
EES02561	Sorghum	cytosol	45.97	47.38
KXG30065	Sorghum	plastid	41.19	41.32
OQU89100	Sorghum	cytosol	42.09	40.75
KXG37270	Sorghum	cytosol	38.21	39.02
EES05992	Sorghum	cytosol	38.21	38.67
OQU85928	Sorghum	cytosol	39.1	38.19
KXG32196	Sorghum	cytosol	37.01	37.92
EER89338	Sorghum	cytosol	39.1	37.86
KXG32301	Sorghum	plastid	36.72	37.5
EER93204	Sorghum	cytosol	36.72	37.27
EES04640	Sorghum	golgi, plastid	37.91	37.03
EES15061	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	40.6	36.36
EES01693	Sorghum	endoplasmic reticulum, golgi, plastid	34.33	35.38
EES01692	Sorghum	cytosol	34.33	35.06
EES01690	Sorghum	cytosol	31.64	32.12

Protein Annotations

MapMan:21.8.1.5	Gene3D:3.40.50.720	EntrezGene:8064009	UniProt:C5YIN0	EnsemblPlants:EES14250	ProteinID:EES14250
ProteinID:EES14250.1	InterPro:Epimerase_deHydtase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009555	GO:GO:0009653	GO:GO:0009987
GO:GO:0016043	GO:GO:0050662	GO:GO:0080110	InterPro:NAD(P)-bd_dom_sf	PFAM:PF01370	PANTHER:PTHR10366
PANTHER:PTHR10366:SF493	EnsemblPlantsGene:SORBI_3007G206000	SUPFAM:SSF51735	unigene:Sbi.9783	InterPro:TKPR1	UniParc:UPI0001A87E34
RefSeq:XP_002444755.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:63606937..63609360

Molecular Weight (calculated)

36416.7 Da

IEP (calculated)

6.434

GRAVY (calculated)

-0.005

Length

335 amino acids

Sequence
(BLAST)

001: MASTGKGKVC VTGASGFIAS WLIKRLLESG YHVLGTVRDP GNHKKVGHLW VLEGAKERLQ LVRADLLEEG SFDDAVMACE GVFHTASPVI TKSDSKEEML
101: NSAINGTLNV LRSCKKNPSL RRVVLTSSSA TVRIKDEADL PPNVLLDETS WSSIEYCESL QIWYAVAKIL AEKAAWEFAK EHRIDLVTVL PTFVIGPNLS
201: PELSPTASDV LGLFQGETVK FTVYGRMGYV HIDDVARCHI LAYESAGAHG RYICNAAVLC CGDLVALLAR RFPAYPIPRS LPSVYGEQTY GFDTSKARAL
301: GLVDLKGVEE MFDDAVDSLR GHGHLPAAED VGKHG

Best Arabidopsis Sequence Match ( AT4G35420.1 )
(BLAST)

001: MDQAKGKVCV TGASGFLASW LVKRLLLEGY EVIGTVRDPG NEKKLAHLWK LEGAKERLRL VKADLMEEGS FDNAIMGCQG VFHTASPVLK PTSNPEEEIL
101: RPAIEGTLNV LRSCRKNPSL KRVVLTSSSS TVRIRDDFDP KIPLDESIWT SVELCKRFQV WYALSKTLAE QAAWKFSEEN GIDLVTVLPS FLVGPSLPPD
201: LCSTASDVLG LLKGETEKFQ WHGQMGYVHI DDVARTHIVV FEHEAAQGRY ICSSNVISLE ELVSFLSARY PSLPIPKRFE KLNRLHYDFD TSKIQSLGLK
301: FKSLEEMFDD CIASLVEQGY LSTVLP

Arabidopsis Description

TKPR1Tetraketide alpha-pyrone reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q500U8]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.