CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008332_P001	Maize	cytosol	92.35	92.35
Zm00001d008331_P001	Maize	cytosol	85.93	85.93
Os01t0283700-01	Rice	cytosol	73.7	73.48
Os01t0283600-00	Rice	cytosol	73.09	73.31
KXG32301	Sorghum	plastid	71.25	71.04
EES05992	Sorghum	cytosol	64.53	63.75
OQU85928	Sorghum	cytosol	63.61	60.64
OQU89100	Sorghum	cytosol	56.27	53.18
EER89338	Sorghum	cytosol	54.13	51.16
EES04640	Sorghum	golgi, plastid	50.76	48.4
EES15061	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	53.52	46.79
KXG30065	Sorghum	plastid	39.76	38.92
KXG37270	Sorghum	cytosol	38.84	38.72
EER99113	Sorghum	mitochondrion	38.84	38.6
EES02561	Sorghum	cytosol	38.23	38.46
EER93204	Sorghum	cytosol	38.53	38.18
EES01692	Sorghum	cytosol	38.23	38.11
EES01693	Sorghum	endoplasmic reticulum, golgi, plastid	37.61	37.85
EES01690	Sorghum	cytosol	37.61	37.27
EES14250	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	37.92	37.01

Protein Annotations

MapMan:21.6.1.5	Gene3D:3.40.50.720	UniProt:A0A1B6Q2N6	InterPro:Epimerase_deHydtase	GO:GO:0003674	GO:GO:0003824
GO:GO:0003854	GO:GO:0005488	GO:GO:0006629	GO:GO:0006694	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0016616	GO:GO:0050662	GO:GO:0055114	EnsemblPlants:KXG32196	ProteinID:KXG32196
ProteinID:KXG32196.1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF01370	PANTHER:PTHR10366	PANTHER:PTHR10366:SF470	EnsemblPlantsGene:SORBI_3003G116800
SUPFAM:SSF51735	UniParc:UPI0001C80A1F	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:10530880..10532956

Molecular Weight (calculated)

36399.9 Da

IEP (calculated)

7.233

GRAVY (calculated)

-0.129

Length

327 amino acids

Sequence
(BLAST)

001: MVEAAAEQLV CVTGAGGFIG SWLVKELLQR GYAVRGTARD PEDSKNSHLR ALDGAQERLS LYHADVLDYM SLRRAFSLCD GVFHVASPIS NDPDLVPVAI
101: EGTKNVMNAA ADMGVQRVVF TSSYGAVHMN PNRNPDRTVD ESCWSDLDFC KQTQNWYCYA KTVAEKTAME EASKRGIQLL IVVPSVTIGR MLQPTLNLTL
201: SAVATYMNGT KKAYSNAVGA YVDVRDVALA HIFVYEDLST HGRYLCIGDM LHQSEFLQMM RELFPQYPIT TKCKDENKPM IKPYKFSTQR LVALGMKFTP
301: LKESLYNTVV SLQENGHIPL LLHKSSL

Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)

001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS

Arabidopsis Description

CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.