CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043013_P001	Maize	cytosol	70.91	93.23
EES01693	Sorghum	endoplasmic reticulum, golgi, plastid	75.15	76.31
EES01692	Sorghum	cytosol	70.3	70.73
KXG37270	Sorghum	cytosol	47.58	47.87
EER93204	Sorghum	cytosol	46.97	46.97
EER89338	Sorghum	cytosol	40.91	39.02
OQU89100	Sorghum	cytosol	40.61	38.73
KXG30065	Sorghum	plastid	39.09	38.62
KXG32196	Sorghum	cytosol	37.27	37.61
EES05992	Sorghum	cytosol	36.97	36.86
KXG32301	Sorghum	plastid	36.36	36.59
OQU85928	Sorghum	cytosol	37.27	35.86
EES04640	Sorghum	golgi, plastid	36.36	34.99
EES15061	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	39.39	34.76
EER99113	Sorghum	mitochondrion	33.64	33.74
EES14250	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	32.12	31.64
EES02561	Sorghum	cytosol	30.91	31.38

Protein Annotations

EnsemblPlants:EES01690	EnsemblPlantsGene:SORBI_3003G342300	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF349	PFAM:PF01370
ProteinID:EES01690	ProteinID:EES01690.2	SEG:seg	SUPFAM:SSF51735	TMHMM:TMhelix	UniParc:UPI00081ABB19
UniProt:C5XNX5	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:66463888..66467290

Molecular Weight (calculated)

36585.3 Da

IEP (calculated)

6.112

GRAVY (calculated)

-0.094

Length

330 amino acids

Sequence
(BLAST)

001: MEAAGDSAGG RGGLLCVTGG SGFIGSWLVR LLLDRGYTVH ATVKNLQDEG ETKHLQALDG ADTRLRLFQM DLLDPASSMR PAIEGARGVF HLASPLTLHT
101: EDPEKELLEP ALKGTLSVLR AAKDCGVHRV VLMSSKSAML PNPAWPANMA MVEDDCWADL ELLKKRQLWY HVSKTLAEKA AWEFTEKEGL QLVVLNPGTT
201: LGPFFTPSVN TSLNILLQLL RGRELELDAV YTGWVDVRDV AQSAIVLYEN PSAQGRHLCL ASMERLVDFA DKIADMYTEF PVHRIKEDKQ GWLMRAKEPS
301: KKLIDLGVRF VPFDVTIRET VDCFRSKGLI

Best Arabidopsis Sequence Match ( AT5G58490.1 )
(BLAST)

001: MLTDEREVVC VTGASGCIGS WLVHQLLLRG YSVHATVKNL QDEKETKHLE GLEGAATRLH LFEMDLLQYD TVSAAINGCS GVFHLASPCI VDEVQDPQKQ
101: LLDPAVKGTI NVLTAAKEAS VKRVVVTSSI SAITPSPNWP ADKIKNEECW AAEDYCRQNG LWYPLSKTLA EKAAWEFAEE KGLDVVVVNP GTVMGPVIPP
201: SLNASMHMLL RLLQGCTETY ENFFMGSVHF KDVALAHILV YEDPYSKGRH LCVEAISHYG DFVAKVAELY PNYNVPKLPR ETQPGLLRDK NASKKLIDLG
301: LKFISMEEII KEGVESLKSK GFIS

Arabidopsis Description

Cinnamoyl-CoA reductase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FGH3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.