Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 2
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d019669_P001 | Maize | cytosol | 91.33 | 92.67 |
| Os09t0127300-01 | Rice | cytosol | 82.66 | 82.42 |
| TraesCS5A01G163400.1 | Wheat | cytosol | 83.53 | 80.95 |
| TraesCS5D01G168400.1 | Wheat | cytosol | 83.53 | 80.95 |
| HORVU5Hr1G050940.1 | Barley | cytosol | 82.95 | 80.17 |
| TraesCS5B01G160700.1 | Wheat | cytosol | 82.95 | 78.63 |
| GSMUA_Achr11P... | Banana | plastid | 70.23 | 72.97 |
| PGSC0003DMT400051049 | Potato | endoplasmic reticulum, peroxisome, plastid | 68.5 | 71.39 |
| Solyc03g116910.2.1 | Tomato | endoplasmic reticulum, peroxisome, plastid | 68.21 | 71.08 |
| PGSC0003DMT400073398 | Potato | cytosol, endoplasmic reticulum, mitochondrion, plastid | 67.05 | 69.88 |
| Solyc06g068440.2.1 | Tomato | cytosol, endoplasmic reticulum, mitochondrion, plastid | 67.05 | 69.88 |
| KRH44552 | Soybean | cytosol | 67.05 | 69.67 |
| CDY35052 | Canola | cytosol | 55.49 | 69.57 |
| KRH47350 | Soybean | cytosol | 66.19 | 68.98 |
| VIT_09s0070g00240.t01 | Wine grape | cytosol | 65.61 | 67.16 |
| KRH09656 | Soybean | cytosol | 64.16 | 66.07 |
| CDX81743 | Canola | cytosol | 64.45 | 65.59 |
| Bra026090.1-P | Field mustard | cytosol | 64.45 | 65.4 |
| Bra035150.1-P | Field mustard | cytosol | 62.43 | 65.06 |
| CDX87345 | Canola | cytosol | 62.43 | 65.06 |
| CDY64860 | Canola | cytosol | 62.14 | 64.95 |
| CDY63972 | Canola | cytosol | 62.14 | 64.95 |
| Bra008438.1-P | Field mustard | cytosol | 62.14 | 64.95 |
| CDY39941 | Canola | cytosol | 62.14 | 64.76 |
| CDY33365 | Canola | cytosol | 64.16 | 64.72 |
| CDY52857 | Canola | cytosol | 63.87 | 64.43 |
| AT1G80820.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 61.56 | 64.16 |
| Bra026737.1-P | Field mustard | cytosol | 63.58 | 64.14 |
| EES04640 | Sorghum | golgi, plastid | 63.58 | 64.14 |
| AT1G15950.1 | Thale cress | cytosol | 63.58 | 63.95 |
| KRH23636 | Soybean | cytosol | 62.43 | 63.91 |
| EES15061 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 65.32 | 60.43 |
| EER89338 | Sorghum | cytosol | 59.83 | 59.83 |
| KXG32196 | Sorghum | cytosol | 53.18 | 56.27 |
| KXG32301 | Sorghum | plastid | 50.87 | 53.66 |
| EES05992 | Sorghum | cytosol | 51.16 | 53.47 |
| OQU85928 | Sorghum | cytosol | 51.73 | 52.19 |
| KXG30065 | Sorghum | plastid | 41.91 | 43.41 |
| EES14250 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 40.75 | 42.09 |
| EES01693 | Sorghum | endoplasmic reticulum, golgi, plastid | 39.02 | 41.54 |
| EER99113 | Sorghum | mitochondrion | 39.31 | 41.34 |
| KXG37270 | Sorghum | cytosol | 39.02 | 41.16 |
| EES02561 | Sorghum | cytosol | 38.44 | 40.92 |
| EER93204 | Sorghum | cytosol | 39.02 | 40.91 |
| EES01690 | Sorghum | cytosol | 38.73 | 40.61 |
| EES01692 | Sorghum | cytosol | 37.86 | 39.94 |
Protein Annotations
| EnsemblPlants:OQU89100 | EnsemblPlantsGene:SORBI_3002G146000 | EntrezGene:8063428 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0050662 | InterPro:Epimerase_deHydtase | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF552 |
| PFAM:PF01370 | ProteinID:OQU89100 | ProteinID:OQU89100.1 | RefSeq:XP_002462058.1 | SEG:seg | SUPFAM:SSF51735 |
| UniParc:UPI0001A842D1 | UniProt:A0A1W0W3Z5 | MapMan:21.6.1.5 | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:29037648..29043667
Molecular Weight (calculated)
38201.8 Da
IEP (calculated)
6.505
GRAVY (calculated)
-0.229
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MPTAETTTPV PPALSGQGRT VCVTGAGGFI ASWLVKRLLE KGYTVRGTVR NPVDPKNDHL RALDGAADRL VLLRADLLDP ESLVEAFSGC DGVFHAASPV
101: TDDPEMMIEP AIRGTQYVMT AAADTGVKRV VFTSSIGTVY MNPYREPNKP VDDTCWSDLE YCKNTQNWYC YAKTVAEQGA WEVARKRGLD LIVVNPVLVL
201: GPLLQPTVNA STDHVMKYLT GSAKTYVNAA QAYVHVQDVA EAHVRVYEAP YAHGRYICAE STLHRGELCR ILAKLFPEYP IPTKCKDDVN PPVTGYKFTN
301: QRLKDLGMDF VPVLQCLYET VKSLQEKGML PVLPPKDDQD QQLHKS
101: TDDPEMMIEP AIRGTQYVMT AAADTGVKRV VFTSSIGTVY MNPYREPNKP VDDTCWSDLE YCKNTQNWYC YAKTVAEQGA WEVARKRGLD LIVVNPVLVL
201: GPLLQPTVNA STDHVMKYLT GSAKTYVNAA QAYVHVQDVA EAHVRVYEAP YAHGRYICAE STLHRGELCR ILAKLFPEYP IPTKCKDDVN PPVTGYKFTN
301: QRLKDLGMDF VPVLQCLYET VKSLQEKGML PVLPPKDDQD QQLHKS
001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS
Arabidopsis Description
CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.