CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, plastid, cytosol, plasma membrane, golgi

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 4
cytosol 1
plastid 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid, secretory
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	golgi, plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0441500-01	Rice	cytosol, peroxisome, plastid	85.29	88.37
Zm00001d050417_P001	Maize	cytosol	84.22	86.78
Zm00001d032152_P001	Maize	cytosol	90.11	82.6
GSMUA_Achr5P04460_001	Banana	cytosol, peroxisome, plastid	72.73	80.95
GSMUA_Achr11P...	Banana	cytosol	70.32	78.51
CDY35052	Canola	cytosol	54.81	74.28
EER89338	Sorghum	cytosol	68.45	73.99
VIT_09s0070g00240.t01	Wine grape	cytosol	66.84	73.96
PGSC0003DMT400073398	Potato	cytosol, endoplasmic reticulum, mitochondrion, plastid	64.71	72.89
CDX81743	Canola	cytosol	66.04	72.65
PGSC0003DMT400051049	Potato	endoplasmic reticulum, peroxisome, plastid	64.44	72.59
Solyc06g068440.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plastid	64.17	72.29
Solyc03g116910.2.1	Tomato	endoplasmic reticulum, peroxisome, plastid	63.9	71.99
Bra026090.1-P	Field mustard	cytosol	65.24	71.55
CDY52857	Canola	cytosol	65.51	71.43
Bra026737.1-P	Field mustard	cytosol	65.51	71.43
CDY33365	Canola	cytosol	65.24	71.14
KRH44552	Soybean	cytosol	63.1	70.87
KRH09656	Soybean	cytosol	63.64	70.83
KRH47350	Soybean	cytosol	62.83	70.78
AT1G15950.1	Thale cress	cytosol	64.97	70.64
KRH23636	Soybean	cytosol	62.03	68.64
CDX87345	Canola	cytosol	59.89	67.47
Bra035150.1-P	Field mustard	cytosol	59.89	67.47
CDY39941	Canola	cytosol	59.63	67.17
CDY64860	Canola	cytosol	59.36	67.07
CDY63972	Canola	cytosol	59.36	67.07
Bra008438.1-P	Field mustard	cytosol	59.36	67.07
AT1G80820.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	58.82	66.27
OQU89100	Sorghum	cytosol	60.43	65.32
EES05992	Sorghum	cytosol	50.0	56.5
EES04640	Sorghum	golgi, plastid	51.07	55.69
OQU85928	Sorghum	cytosol	49.47	53.94
KXG32196	Sorghum	cytosol	46.79	53.52
KXG32301	Sorghum	plastid	45.19	51.52
KXG30065	Sorghum	plastid	40.11	44.91
KXG37270	Sorghum	cytosol	38.77	44.21
EER93204	Sorghum	cytosol	37.97	43.03
EES01692	Sorghum	cytosol	37.17	42.38
EES01693	Sorghum	endoplasmic reticulum, golgi, plastid	36.63	42.15
EER99113	Sorghum	mitochondrion	36.63	41.64
EES14250	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	36.36	40.6
EES02561	Sorghum	cytosol	34.76	40.0
EES01690	Sorghum	cytosol	34.76	39.39

Protein Annotations

MapMan:21.6.1.5	Gene3D:3.40.50.720	PDB:5TQM	EntrezGene:8077848	UniProt:C5YLL4	EnsemblPlants:EES15061
ProteinID:EES15061	ProteinID:EES15061.1	InterPro:Epimerase_deHydtase	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0050662	InterPro:NAD(P)-bd_dom_sf	PFAM:PF01370	PANTHER:PTHR10366	PANTHER:PTHR10366:SF404
EnsemblPlantsGene:SORBI_3007G141200	SUPFAM:SSF51735	unigene:Sbi.1108	UniParc:UPI0001A87B99	RefSeq:XP_002445566.1	SEG:seg

Description

hypothetical protein

Coordinates

chr7:-:57060873..57068026

Molecular Weight (calculated)

40234.8 Da

IEP (calculated)

5.471

GRAVY (calculated)

-0.095

Length

374 amino acids

Sequence
(BLAST)

001: MTVVDAVSTD AAGAAPAAAA APVVVAQPGN GQTVCVTGAA GYIASWLVKM LLEKGYTVKG TVRNPDDPKN AHLKALDGAA ERLILCKADL LDYDAICRAV
101: QGCQGVFHTA SPVTDDPEQM VEPAVRGTEY VINAAAEAGT VRRVVFTSSI GAVTMDPSRG PDVVVDESCW SDLEFCKKTR NWYCYGKAVA EQAAWDAARQ
201: RGVDLVVVNP VLVVGPLLQP TVNASIAHVL KYLDGSARTF ANAVQAYVDV RDVADAHLRV FESPAASGRY LCAERVLHRE DVVRILAKLF PEYPVPTRCS
301: DEVNPRKQPY KFSNQKLRDL GLEFRPVSQS LYDTVKNLQE KGHLPVLGEQ TTEADKEEAN AAAEVQQGGI AIRA

Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)

001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS

Arabidopsis Description

CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.