CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, plastid
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01693	Sorghum	endoplasmic reticulum, golgi, plastid	74.7	75.38
HORVU3Hr1G088020.2	Barley	cytosol	75.0	75.23
TraesCS3B01G380500.1	Wheat	cytosol	74.09	74.31
TraesCS3A01G348600.1	Wheat	cytosol	73.78	73.78
TraesCS3B01G380600.1	Wheat	cytosol	74.09	73.64
TraesCS3D01G342200.2	Wheat	cytosol	74.39	71.14
EES01690	Sorghum	cytosol	70.73	70.3
Os01t0828100-00	Rice	plasma membrane	48.17	68.1
EER93204	Sorghum	cytosol	48.78	48.48
KXG37270	Sorghum	cytosol	48.48	48.48
KXG32301	Sorghum	plastid	39.33	39.33
KXG30065	Sorghum	plastid	39.33	38.62
EER89338	Sorghum	cytosol	40.55	38.44
KXG32196	Sorghum	cytosol	38.11	38.23
OQU89100	Sorghum	cytosol	39.94	37.86
EES05992	Sorghum	cytosol	37.8	37.46
EES15061	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	42.38	37.17
OQU85928	Sorghum	cytosol	38.72	37.03
EER99113	Sorghum	mitochondrion	34.45	34.35
EES14250	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	35.06	34.33
EES04640	Sorghum	golgi, plastid	35.37	33.82
EES02561	Sorghum	cytosol	32.93	33.23

Protein Annotations

EnsemblPlants:EES01692	EnsemblPlantsGene:SORBI_3003G342100	EntrezGene:8057737	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF553
PFAM:PF01370	ProteinID:EES01692	ProteinID:EES01692.1	RefSeq:XP_002456572.1	SUPFAM:SSF51735	unigene:Sbi.848
UniParc:UPI0001A845E8	UniProt:C5XNX7	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:66458475..66460765

Molecular Weight (calculated)

36176.7 Da

IEP (calculated)

5.667

GRAVY (calculated)

-0.075

Length

328 amino acids

Sequence
(BLAST)

001: MASHGDGGGG SSLVCVTGGS GFIGSWLVRL LLGRGYTVHA TVKNLQDESE TKHLQAMDGA NSRLRLFQMD LLEPASIRPA VEGARGVFHV ASPVILHRAQ
101: DPENELVEPA LKGTLSVLRA AKDCGVGRVV MVSSQTAMVP NPAWPADKVV DEDSWADIEQ LKKLQLWYNV SKTLAEKAAW DFAEKEGLEL VVLNPALVLG
201: PTLTPNIMAS LQMFLQIMGG KKYDMDEFFI GCVDVRDVAQ SLIVLYENTS AEGRHLCLES SERMVDFTNR LAHLYPEFSV YRIQEDKQDW VVRAKDPSKK
301: LINLGVRFTP LDKTIADTMD CFRSKGLI

Best Arabidopsis Sequence Match ( AT5G58490.1 )
(BLAST)

001: MLTDEREVVC VTGASGCIGS WLVHQLLLRG YSVHATVKNL QDEKETKHLE GLEGAATRLH LFEMDLLQYD TVSAAINGCS GVFHLASPCI VDEVQDPQKQ
101: LLDPAVKGTI NVLTAAKEAS VKRVVVTSSI SAITPSPNWP ADKIKNEECW AAEDYCRQNG LWYPLSKTLA EKAAWEFAEE KGLDVVVVNP GTVMGPVIPP
201: SLNASMHMLL RLLQGCTETY ENFFMGSVHF KDVALAHILV YEDPYSKGRH LCVEAISHYG DFVAKVAELY PNYNVPKLPR ETQPGLLRDK NASKKLIDLG
301: LKFISMEEII KEGVESLKSK GFIS

Arabidopsis Description

Cinnamoyl-CoA reductase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FGH3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.