CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G046700.1	Wheat	cytosol	83.08	82.07
TraesCS3B01G036600.1	Wheat	cytosol	82.46	81.46
TraesCS3D01G033300.1	Wheat	cytosol	82.15	81.16
Os01t0127500-01	Rice	cytosol	80.31	77.45
HORVU3Hr1G004270.1	Barley	mitochondrion	54.15	73.33
Bra008822.1-P	Field mustard	cytosol	54.46	64.36
GSMUA_Achr6P09630_001	Banana	cytosol	63.08	64.06
KRH75363	Soybean	cytosol	62.77	63.95
Bra004316.1-P	Field mustard	cytosol, nucleus, peroxisome	62.77	63.55
CDX69634	Canola	cytosol	62.77	63.55
CDY38590	Canola	cytosol	62.46	63.24
KRH49476	Soybean	cytosol	61.85	63.01
AT1G68540.1	Thale cress	cytosol	62.15	62.93
VIT_01s0011g03480.t01	Wine grape	cytosol, plastid	61.85	62.81
CDX96012	Canola	cytosol, nucleus, peroxisome	61.85	62.62
Solyc01g068080.2.1	Tomato	cytosol, extracellular, plastid	60.31	61.25
PGSC0003DMT400013318	Potato	cytosol, extracellular, plastid	60.31	61.25
CDY42105	Canola	cytosol, plastid	57.54	58.26
CDX84989	Canola	cytosol	56.92	57.63
AT1G25460.1	Thale cress	cytosol, plastid	55.38	56.43
CDX84988	Canola	cytosol	49.54	52.79
Bra024747.1-P	Field mustard	extracellular	38.15	52.54
Bra024744.1-P	Field mustard	cytosol	57.54	51.52
CDY42108	Canola	cytosol	36.62	50.64
EES14250	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	47.38	45.97
EER99113	Sorghum	mitochondrion	46.15	45.59
OQU89100	Sorghum	cytosol	40.92	38.44
KXG32196	Sorghum	cytosol	38.46	38.23
EER89338	Sorghum	cytosol	39.38	36.99
KXG37270	Sorghum	cytosol	37.23	36.89
KXG30065	Sorghum	plastid	37.85	36.83
EER93204	Sorghum	cytosol	36.62	36.06
EES05992	Sorghum	cytosol	36.31	35.65
EES04640	Sorghum	golgi, plastid	37.54	35.57
EES15061	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	40.0	34.76
KXG32301	Sorghum	plastid	35.08	34.76
OQU85928	Sorghum	cytosol	35.69	33.82
EES01692	Sorghum	cytosol	33.23	32.93
EES01693	Sorghum	endoplasmic reticulum, golgi, plastid	32.0	32.0
EES01690	Sorghum	cytosol	31.38	30.91

Protein Annotations

EnsemblPlants:EES02561	EnsemblPlantsGene:SORBI_3003G088200	EntrezGene:8066527	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF503
PFAM:PF01370	ProteinID:EES02561	ProteinID:EES02561.1	RefSeq:XP_002457441.1	SEG:seg	SUPFAM:SSF51735
unigene:Sbi.21094	UniParc:UPI0001A84BD9	UniProt:C5XQX4	MapMan:21.8.1.5	:	:

Description

hypothetical protein

Coordinates

chr3:-:7663763..7665433

Molecular Weight (calculated)

35609.6 Da

IEP (calculated)

6.230

GRAVY (calculated)

-0.083

Length

325 amino acids

Sequence
(BLAST)

001: MPEYCVTGGT GFIAAHLIRA LLAAGHSVRA TVRDPEDEGK VGFLWELEGA GERLQLVRAD LMVEGSFDDA VSGVDGVFHT ASPVVVVGKD NKDVQETLVE
101: PIVKGAANVL RSCARAAAPD ERPRRVVFTS SCSCVRYCHA ATLNESHWSD ADYCKSHDLW YAYAKTVAEK EAWRLAKEHG IDLVVVNPSF VIGPALGPKP
201: TSTILIVLAM LKGELGKYPN TTIGFVHVDD VVLCHVLAME DARASGRLIC SCDVAAHWSE ILESLRERYP QYPIPRECSS SQKGDDRPHR MDTSKVKALG
301: FPPFLSVHQM FDDCIKSFQD KGLLQ

Best Arabidopsis Sequence Match ( AT1G68540.1 )
(BLAST)

001: MSEYLVTGGT GFIASYIIKS LLELGHTVRT TVRNPRDEEK VGFLWEFQGA KQRLKILQAD LTVEGSFDEA VNGVDGVFHT ASPVLVPQDH NIQETLVDPI
101: IKGTTNVMSS CAKSKATLKR IVLTSSCSSI RYRFDATEAS PLNESHWSDP EYCKRFNLWY GYAKTLGERE AWRIAEEKGL DLVVVNPSFV VGPLLGPKPT
201: STLLMILAIA KGLAGEYPNF TVGFVHIDDV VAAHVLAMEE PKASGRIICS SSVAHWSEII ELMRNKYPNY PFENKCSNKE GDNSPHSMDT RKIHELGFGS
301: FKSLPEMFDD CIISFQKKGL L

Arabidopsis Description

TKPR2TKPR2 [Source:UniProtKB/TrEMBL;Acc:A0A178W2A9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.