CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plastid

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01690	Sorghum	cytosol	76.31	75.15
EES01692	Sorghum	cytosol	75.38	74.7
KXG37270	Sorghum	cytosol	51.69	51.22
EER93204	Sorghum	cytosol	50.15	49.39
EES05992	Sorghum	cytosol	40.31	39.58
EER89338	Sorghum	cytosol	41.85	39.31
KXG30065	Sorghum	plastid	40.31	39.22
OQU89100	Sorghum	cytosol	41.54	39.02
OQU85928	Sorghum	cytosol	40.31	38.19
KXG32196	Sorghum	cytosol	37.85	37.61
KXG32301	Sorghum	plastid	37.85	37.5
EES15061	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	42.15	36.63
EES04640	Sorghum	golgi, plastid	37.85	35.86
EER99113	Sorghum	mitochondrion	36.0	35.56
EES14250	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	35.38	34.33
EES02561	Sorghum	cytosol	32.0	32.0

Protein Annotations

EnsemblPlants:EES01693	EnsemblPlantsGene:SORBI_3003G342200	EntrezGene:8057738	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF349
PFAM:PF01370	ProteinID:EES01693	ProteinID:EES01693.1	RefSeq:XP_002456573.1	SUPFAM:SSF51735	TMHMM:TMhelix
unigene:Sbi.5301	UniParc:UPI0001A845E9	UniProt:C5XNX8	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr3:+:66461566..66463887

Molecular Weight (calculated)

35584.4 Da

IEP (calculated)

5.666

GRAVY (calculated)

-0.014

Length

325 amino acids

Sequence
(BLAST)

001: MAAAGDAGGL LVCVTGASGF IGSWLVRCLL DRGYTVHATV KNLQDEGETK HLQAMGGADA RLRLFQMDLV DPASVQPAIE GAHGVFHLAS PMILQAEDPE
101: KELLEPAVKG TLNVLRAAKD CGVGRVVLMS SQAAMVPNPN WPPGKVIDDD CWADVELLKK LQLWYSVSKT LAEKAAWDFA EKEELQIAVL NPGMVLGPML
201: TPSVNASLRL LLQILGGERI DLDDIYMGCV DVRDVAHSLI MLYENPSAQG RHLCMESAER LVDLANKIAD LYPEHPVQRI REDKQGWVVR AKDPSKKLIK
301: LGVRFTPLDK TIRDTVDCFR SKGLI

Best Arabidopsis Sequence Match ( AT5G58490.1 )
(BLAST)

001: MLTDEREVVC VTGASGCIGS WLVHQLLLRG YSVHATVKNL QDEKETKHLE GLEGAATRLH LFEMDLLQYD TVSAAINGCS GVFHLASPCI VDEVQDPQKQ
101: LLDPAVKGTI NVLTAAKEAS VKRVVVTSSI SAITPSPNWP ADKIKNEECW AAEDYCRQNG LWYPLSKTLA EKAAWEFAEE KGLDVVVVNP GTVMGPVIPP
201: SLNASMHMLL RLLQGCTETY ENFFMGSVHF KDVALAHILV YEDPYSKGRH LCVEAISHYG DFVAKVAELY PNYNVPKLPR ETQPGLLRDK NASKKLIDLG
301: LKFISMEEII KEGVESLKSK GFIS

Arabidopsis Description

Cinnamoyl-CoA reductase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FGH3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.