CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045101_P001	Maize	cytosol	89.88	91.47
TraesCS7D01G150500.1	Wheat	cytosol	81.79	82.99
HORVU7Hr1G030380.2	Barley	cytosol	81.79	82.99
TraesCS7A01G149000.1	Wheat	cytosol	82.37	82.61
TraesCS7D01G150600.1	Wheat	cytosol	81.79	82.51
HORVU7Hr1G022220.4	Barley	cytosol	79.77	81.18
TraesCS7B01G052700.1	Wheat	plastid	81.79	76.69
CDY35052	Canola	cytosol	57.8	72.46
VIT_09s0070g00240.t01	Wine grape	cytosol	69.94	71.6
TraesCS7B01G052600.1	Wheat	cytosol	81.21	71.5
GSMUA_Achr5P04460_001	Banana	cytosol, peroxisome, plastid	68.79	70.83
GSMUA_Achr11P...	Banana	cytosol	68.21	70.45
PGSC0003DMT400051049	Potato	endoplasmic reticulum, peroxisome, plastid	66.19	68.98
EES15061	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	73.99	68.45
CDX81743	Canola	cytosol	67.05	68.24
Solyc06g068440.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plastid	65.32	68.07
PGSC0003DMT400073398	Potato	cytosol, endoplasmic reticulum, mitochondrion, plastid	65.32	68.07
Bra026090.1-P	Field mustard	cytosol	67.05	68.04
Bra026737.1-P	Field mustard	cytosol	67.34	67.93
CDY52857	Canola	cytosol	67.34	67.93
Solyc03g116910.2.1	Tomato	endoplasmic reticulum, peroxisome, plastid	65.03	67.77
CDY33365	Canola	cytosol	67.05	67.64
AT1G15950.1	Thale cress	cytosol	67.05	67.44
KRH47350	Soybean	cytosol	64.16	66.87
CDY63972	Canola	cytosol	63.87	66.77
KRH09656	Soybean	cytosol	64.74	66.67
KRH44552	Soybean	cytosol	63.87	66.37
CDX87345	Canola	cytosol	63.58	66.27
Bra035150.1-P	Field mustard	cytosol	63.58	66.27
KRH23636	Soybean	cytosol	64.45	65.98
AT1G80820.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	63.29	65.96
CDY39941	Canola	cytosol	63.29	65.96
CDY64860	Canola	cytosol	63.01	65.86
Bra008438.1-P	Field mustard	cytosol	63.01	65.86
OQU89100	Sorghum	cytosol	59.83	59.83
EES05992	Sorghum	cytosol	54.91	57.4
EES04640	Sorghum	golgi, plastid	55.78	56.27
OQU85928	Sorghum	cytosol	54.91	55.39
KXG32196	Sorghum	cytosol	51.16	54.13
KXG32301	Sorghum	plastid	50.87	53.66
KXG37270	Sorghum	cytosol	40.46	42.68
EER93204	Sorghum	cytosol	40.46	42.42
KXG30065	Sorghum	plastid	40.46	41.92
EES01693	Sorghum	endoplasmic reticulum, golgi, plastid	39.31	41.85
EES01690	Sorghum	cytosol	39.02	40.91
EES01692	Sorghum	cytosol	38.44	40.55
EER99113	Sorghum	mitochondrion	38.44	40.43
EES02561	Sorghum	cytosol	36.99	39.38
EES14250	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	37.86	39.1

Protein Annotations

EnsemblPlants:EER89338	EnsemblPlantsGene:SORBI_3010G066000	EntrezGene:8076207	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF404
PFAM:PF01370	ProteinID:EER89338	ProteinID:EER89338.1	RefSeq:XP_002437971.1	SEG:seg	SUPFAM:SSF51735
unigene:Sbi.3181	UniParc:UPI0001A89732	UniProt:C5Z5I9	MapMan:21.6.1.5	:	:

Description

hypothetical protein

Coordinates

chr10:-:5255690..5259051

Molecular Weight (calculated)

37060.0 Da

IEP (calculated)

6.101

GRAVY (calculated)

-0.096

Length

346 amino acids

Sequence
(BLAST)

001: MTVVGGDDAA AAAAGRGQTT TVCVTGAGGY VGSWIVKLLL ERGYAVRGTV RNPDDAKNAH LRALPGATER LALCKADLLD YDTLRAAIAG CHGVFHTASP
101: VTDDPEEMVE PAVTGTRYII DAAAEAGTVR RVVLTSSIGA VAMDPNRSPD AVVDESCWSD LDFCKKTKNW YCYGKAVAEQ AAWEEAAARG VDLVVVNPVL
201: VQGPALQPSV NASLMHVLKY LNGSAKTYAN AVQAYVHVRD AADAHVRVFE APHAAGRYIC ADGAVLHRED VVRTLRKFFP DYPVPERCSD EVNPRKQPYK
301: ISNQKLRDLG LEFTPAAQAL YDTVICFQEK GIIPIPAPTP SPSPEA

Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)

001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS

Arabidopsis Description

CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.