Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU85928 | Sorghum | cytosol | 87.31 | 84.26 |
| Zm00001d051938_P002 | Maize | cytosol | 93.66 | 83.78 |
| Os02t0808800-01 | Rice | cytosol | 84.29 | 82.54 |
| Os02t0811400-00 | Rice | cytosol | 82.78 | 81.31 |
| TraesCS6D01G366200.1 | Wheat | cytosol | 80.06 | 76.81 |
| TraesCS6D01G365700.1 | Wheat | cytosol | 80.06 | 76.81 |
| TraesCS6A01G381400.1 | Wheat | cytosol | 79.15 | 75.94 |
| TraesCS6B01G420200.1 | Wheat | cytosol | 78.85 | 75.65 |
| TraesCS6B01G420000.1 | Wheat | cytosol | 77.04 | 73.91 |
| Os02t0811800-01 | Rice | cytosol | 75.23 | 73.45 |
| TraesCS6B01G420500.1 | Wheat | cytosol | 73.72 | 72.19 |
| TraesCS6D01G366400.1 | Wheat | cytosol | 71.9 | 71.47 |
| TraesCS6D01G365900.1 | Wheat | cytosol | 72.81 | 71.3 |
| TraesCS5B01G414300.1 | Wheat | cytosol | 71.0 | 70.15 |
| TraesCS6A01G380800.1 | Wheat | cytosol | 71.9 | 70.0 |
| TraesCS6B01G420900.1 | Wheat | peroxisome | 72.51 | 69.97 |
| TraesCS6D01G369500.1 | Wheat | peroxisome | 72.21 | 69.88 |
| TraesCS5A01G410100.1 | Wheat | cytosol | 70.09 | 69.25 |
| TraesCS5A01G410400.1 | Wheat | cytosol | 70.39 | 68.93 |
| HORVU6Hr1G089340.1 | Barley | mitochondrion | 79.46 | 68.13 |
| TraesCS6A01G381100.1 | Wheat | cytosol | 57.4 | 68.1 |
| HORVU6Hr1G089460.2 | Barley | cytosol | 73.11 | 67.79 |
| Os02t0811600-00 | Rice | cytosol | 58.61 | 66.21 |
| TraesCS6D01G366000.1 | Wheat | cytosol | 75.83 | 65.19 |
| TraesCS6A01G380900.1 | Wheat | cytosol | 75.23 | 64.84 |
| KXG32196 | Sorghum | cytosol | 63.75 | 64.53 |
| HORVU6Hr1G089350.2 | Barley | cytosol, peroxisome | 71.0 | 63.86 |
| TraesCS5B01G414500.1 | Wheat | mitochondrion, plastid | 69.79 | 63.46 |
| TraesCS6A01G381700.1 | Wheat | golgi, mitochondrion | 71.6 | 62.86 |
| KXG32301 | Sorghum | plastid | 61.63 | 62.2 |
| EER89338 | Sorghum | cytosol | 57.4 | 54.91 |
| OQU89100 | Sorghum | cytosol | 53.47 | 51.16 |
| EES15061 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 56.5 | 50.0 |
| EES04640 | Sorghum | golgi, plastid | 51.66 | 49.85 |
| EES01693 | Sorghum | endoplasmic reticulum, golgi, plastid | 39.58 | 40.31 |
| EER93204 | Sorghum | cytosol | 39.88 | 40.0 |
| KXG30065 | Sorghum | plastid | 39.88 | 39.52 |
| KXG37270 | Sorghum | cytosol | 38.97 | 39.33 |
| EER99113 | Sorghum | mitochondrion | 38.97 | 39.21 |
| EES14250 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 38.67 | 38.21 |
| EES01692 | Sorghum | cytosol | 37.46 | 37.8 |
| EES01690 | Sorghum | cytosol | 36.86 | 36.97 |
| EES02561 | Sorghum | cytosol | 35.65 | 36.31 |
Protein Annotations
| EnsemblPlants:EES05992 | EnsemblPlantsGene:SORBI_3004G340200 | EntrezGene:8056422 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0050662 | InterPro:Epimerase_deHydtase | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF353 |
| PFAM:PF01370 | ProteinID:EES05992 | ProteinID:EES05992.1 | RefSeq:XP_002453016.1 | SEG:seg | SUPFAM:SSF51735 |
| UniParc:UPI0001A85BE7 | UniProt:C5XV87 | MapMan:21.6.1.5 | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:67204166..67206072
Molecular Weight (calculated)
36419.9 Da
IEP (calculated)
7.804
GRAVY (calculated)
-0.139
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSNCGEEKE LVCVTGAGGF IGSWVVKELL QRGYRVRGTA RDPADSKNAH LLALDGAKER LTLCRADVLD RASLHAAFAG CNGVFHVASP VSNDPELVPV
101: AVEGTRNVIN AAADEGARRV VFTSSYGAVH MDPNRSPDAV LDETCWSDYD FCKRSDNLYC CAKMMAEITA TEEAAARGLQ LAVVLPCMTM GPMLQQTLNF
201: STNHVARYLM GTKRSIPNAV AAYVDVRDVA RAHVLAYERP SACGRYLCIG TVLHREQLVA MLKELFPQYP VTAKCEDDGK PMAKPFKFSN QRLRDLGLEF
301: TPLRKSLYET VVCLQQKGHL PVIQQQQRAY L
101: AVEGTRNVIN AAADEGARRV VFTSSYGAVH MDPNRSPDAV LDETCWSDYD FCKRSDNLYC CAKMMAEITA TEEAAARGLQ LAVVLPCMTM GPMLQQTLNF
201: STNHVARYLM GTKRSIPNAV AAYVDVRDVA RAHVLAYERP SACGRYLCIG TVLHREQLVA MLKELFPQYP VTAKCEDDGK PMAKPFKFSN QRLRDLGLEF
301: TPLRKSLYET VVCLQQKGHL PVIQQQQRAY L
001: MLVDGKLVCV TGAGGYIASW IVKLLLERGY TVRGTVRNPT DPKNNHLREL QGAKERLTLH SADLLDYEAL CATIDGCDGV FHTASPMTDD PETMLEPAVN
101: GAKFVIDAAA KAKVKRVVFT SSIGAVYMNP NRDTQAIVDE NCWSDLDFCK NTKNWYCYGK MLAEQSAWET AKAKGVDLVV LNPVLVLGPP LQSAINASLV
201: HILKYLTGSA KTYANLTQVY VDVRDVALGH VLVYEAPSAS GRYILAETAL HRGEVVEILA KFFPEYPLPT KCSDEKNPRA KPYKFTTQKI KDLGLEFKPI
301: KQSLYESVKS LQEKGHLPLP QDSNQNEVII ES
101: GAKFVIDAAA KAKVKRVVFT SSIGAVYMNP NRDTQAIVDE NCWSDLDFCK NTKNWYCYGK MLAEQSAWET AKAKGVDLVV LNPVLVLGPP LQSAINASLV
201: HILKYLTGSA KTYANLTQVY VDVRDVALGH VLVYEAPSAS GRYILAETAL HRGEVVEILA KFFPEYPLPT KCSDEKNPRA KPYKFTTQKI KDLGLEFKPI
301: KQSLYESVKS LQEKGHLPLP QDSNQNEVII ES
Arabidopsis Description
CCR2Cinnamoyl-CoA reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAH9]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.