Factsheet for TraesCS6D01G366000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G365700.1	Wheat	cytosol	82.08	91.59
TraesCS6B01G420000.1	Wheat	cytosol	81.56	91.01
TraesCS6D01G366200.1	Wheat	cytosol	79.48	88.7
TraesCS6A01G381100.1	Wheat	cytosol	61.56	84.95
HORVU6Hr1G089340.1	Barley	mitochondrion	80.52	80.31
Os02t0811400-00	Rice	cytosol	67.79	77.45
Os02t0808800-01	Rice	cytosol	67.79	77.22
EES05992	Sorghum	cytosol	65.19	75.83
TraesCS6D01G365900.1	Wheat	cytosol	64.94	73.96
OQU85928	Sorghum	cytosol	64.68	72.59
TraesCS6D01G369500.1	Wheat	peroxisome	64.42	72.51
TraesCS6D01G366400.1	Wheat	cytosol	61.82	71.47
Os02t0811800-01	Rice	cytosol	61.82	70.21
Zm00001d051938_P002	Maize	cytosol	66.75	69.46
Os02t0811600-00	Rice	cytosol	49.61	65.19
TraesCS7D01G150600.1	Wheat	cytosol	48.05	53.94
TraesCS7D01G150500.1	Wheat	cytosol	47.53	53.67
TraesCS5D01G232400.1	Wheat	cytosol, peroxisome, plastid	48.57	53.28
TraesCS5D01G073300.1	Wheat	cytosol	44.68	51.19
TraesCS5D01G073400.1	Wheat	cytosol	44.16	50.15
TraesCS5D01G168400.1	Wheat	cytosol	44.94	48.46
TraesCS6D01G136600.2	Wheat	extracellular, vacuole	42.6	47.67
TraesCS5D01G541100.1	Wheat	golgi	34.29	40.0
TraesCS5D01G486300.2	Wheat	cytosol	34.03	39.7
TraesCS5D01G540800.1	Wheat	plastid	33.51	39.09
TraesCS3D01G033300.1	Wheat	cytosol	32.47	37.99
TraesCS4D01G343400.1	Wheat	cytosol	32.99	37.46
TraesCS7D01G248800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	31.17	36.47
TraesCS3D01G342200.2	Wheat	cytosol	31.95	35.86
TraesCS5D01G278800.1	Wheat	mitochondrion	32.21	35.63

Protein Annotations

EnsemblPlants:TraesCS6D01G366000.1	EnsemblPlantsGene:TraesCS6D01G366000	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF353	PFAM:PF01370
SEG:seg	SUPFAM:SSF51735	TIGR:cd08958	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr6D:-:454748122..454749504

Molecular Weight (calculated)

42364.2 Da

IEP (calculated)

7.830

GRAVY (calculated)

-0.059

Length

385 amino acids

Sequence
(BLAST)

001: MPSIDKATDN GELKQRQPEQ ELVCVTGAGG FIGSWVVKEL LLPGYRVRGT ARDPGKSVPD QKNTHLLAME GAEERLTLCR ADVLNYDGLR AAFRGCHGVF
101: HVASPVEPVS SLPLLCSLLA ILTSAAYRVA YLVLCYVVFQ DLVPVAVEGT RNVIRAAADA GVRRVVFTSS YGAVHMDPNR SPDAVLDETC WSDYEYCKNT
201: GNLYCCAKMM AEITATEEAA KRGLELAVVV PSMTVGPMLQ QSLNFSSSHV ARYLTGVKPT YPNAVAAYTD VRDVARAHVL VYEHPDAHGR YLCIGAVLHR
301: AHFLQLLGDL FPQYNITAKC EDDGKPMAKP YKFSNRRLRD MGLDFTPLKE SLYETVTCLQ KNGHLPLPVV AMAPKRDRGH FCLVK

Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)

001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS

Arabidopsis Description

CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.