Factsheet for TraesCS7D01G248800.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, cytosol, plasma membrane, golgi

Predictor Summary:

mitochondrion 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid, secretory
Any Predictor:	cytosol, mitochondrion, plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G182300.1
TraesCS4B01G136100.2
TraesCS4D01G130900.1
TraesCS5A01G153500.1
TraesCS5B01G152300.1
TraesCS5D01G158800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G35420.1	TraesCS4A01G182300.1	AT3G08530.1	21798944
AT4G35420.1	TraesCS4B01G136100.2	AT3G08530.1	21798944
AT4G35420.1	TraesCS4D01G130900.1	AT3G08530.1	21798944
AT4G35420.1	TraesCS5A01G153500.1	AT3G08530.1	21798944
AT4G35420.1	TraesCS5B01G152300.1	AT3G08530.1	21798944
AT4G35420.1	TraesCS5D01G158800.1	AT3G08530.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G141100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	99.09	99.09
TraesCS7A01G250100.1	Wheat	cytosol, mitochondrion, plastid	98.48	86.17
Os08t0515900-01	Rice	cytosol	72.04	80.34
EES14250	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	80.24	78.81
TraesCS5D01G278800.1	Wheat	mitochondrion	69.3	65.52
VIT_03s0038g04220.t01	Wine grape	endoplasmic reticulum	63.83	65.02
CDY24810	Canola	cytosol	62.01	64.35
CDX75502	Canola	cytosol, extracellular, plastid	62.01	63.95
Bra010535.1-P	Field mustard	cytosol	60.18	63.87
GSMUA_AchrUn_...	Banana	cytosol	62.61	63.38
CDX69139	Canola	cytosol, extracellular, plastid	61.09	63.01
CDY41656	Canola	cytosol, plastid, vacuole	60.49	62.78
AT4G35420.1	Thale cress	extracellular	62.01	62.58
PGSC0003DMT400065107	Potato	cytosol	62.61	61.49
Solyc04g008780.2.1	Tomato	cytosol	62.31	60.65
KRH23414	Soybean	mitochondrion	59.27	58.91
KRH09917	Soybean	mitochondrion	58.97	58.43
Zm00001d031488_P002	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	59.57	57.14
VIT_03s0038g04230.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	41.34	54.18
TraesCS5D01G541100.1	Wheat	golgi	43.16	43.03
TraesCS4D01G343400.1	Wheat	cytosol	44.07	42.77
TraesCS5D01G540800.1	Wheat	plastid	42.86	42.73
TraesCS3D01G033300.1	Wheat	cytosol	41.34	41.34
TraesCS7D01G150500.1	Wheat	cytosol	41.03	39.59
TraesCS7D01G150600.1	Wheat	cytosol	41.03	39.36
TraesCS5D01G073300.1	Wheat	cytosol	39.51	38.69
TraesCS5D01G073400.1	Wheat	cytosol	39.51	38.35
TraesCS6D01G369500.1	Wheat	peroxisome	39.21	37.72
TraesCS5D01G232400.1	Wheat	cytosol, peroxisome, plastid	39.82	37.32
TraesCS5D01G168400.1	Wheat	cytosol	40.43	37.25
TraesCS6D01G136600.2	Wheat	extracellular, vacuole	37.39	35.76
TraesCS6D01G366200.1	Wheat	cytosol	37.39	35.65
TraesCS6D01G365900.1	Wheat	cytosol	36.47	35.5
TraesCS5D01G486300.2	Wheat	cytosol	35.26	35.15
TraesCS6D01G365700.1	Wheat	cytosol	36.47	34.78
TraesCS6D01G366400.1	Wheat	cytosol	34.95	34.53
TraesCS3D01G342200.2	Wheat	cytosol	34.35	32.94
TraesCS6D01G366000.1	Wheat	cytosol	36.47	31.17

Protein Annotations

MapMan:21.8.1.5	Gene3D:3.40.50.720	InterPro:Epimerase_deHydtase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009555	GO:GO:0009653
GO:GO:0009987	GO:GO:0016043	GO:GO:0050662	GO:GO:0080110	InterPro:NAD(P)-bd_dom_sf	PFAM:PF01370
PANTHER:PTHR10366	PANTHER:PTHR10366:SF493	SUPFAM:SSF51735	InterPro:TKPR1	EnsemblPlantsGene:TraesCS7D01G248800	EnsemblPlants:TraesCS7D01G248800.1
TIGR:cd08958	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:220284725..220286317

Molecular Weight (calculated)

36021.2 Da

IEP (calculated)

5.713

GRAVY (calculated)

-0.019

Length

329 amino acids

Sequence
(BLAST)

001: MANTSKGKVC VTGASGFVAS WLVKRLLESG YHVLGTVRDP GNQKKVAHLW NLAGAKERLE LVRADLLEEG SFDDAVMACE GIFHTASPII TNADSKEEML
101: DSAINGTLNV LRSCKKNPFL KRVVLTSSSS TVRLRDEAEF PPNVLLDETS WSSVEFCESI QIWYAVAKIL AEKSAWEFAK ENNIDLVAVL PTFVIGPNLS
201: PVLGPTASDV LGLFKGETEK FTIFGRMGYV HIDDVASCHI LVYETAGAKG RYICNSAVLG SDELVALLAK RFPSFPIPKS LPNIYGEQTY GYNTSKIRKL
301: GLEFRGVEEM FDDSVESLKA HGYLREGAA

Best Arabidopsis Sequence Match ( AT4G35420.1 )
(BLAST)

001: MDQAKGKVCV TGASGFLASW LVKRLLLEGY EVIGTVRDPG NEKKLAHLWK LEGAKERLRL VKADLMEEGS FDNAIMGCQG VFHTASPVLK PTSNPEEEIL
101: RPAIEGTLNV LRSCRKNPSL KRVVLTSSSS TVRIRDDFDP KIPLDESIWT SVELCKRFQV WYALSKTLAE QAAWKFSEEN GIDLVTVLPS FLVGPSLPPD
201: LCSTASDVLG LLKGETEKFQ WHGQMGYVHI DDVARTHIVV FEHEAAQGRY ICSSNVISLE ELVSFLSARY PSLPIPKRFE KLNRLHYDFD TSKIQSLGLK
301: FKSLEEMFDD CIASLVEQGY LSTVLP

Arabidopsis Description

TKPR1Tetraketide alpha-pyrone reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q500U8]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.