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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, vacuole, cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 2
  • vacuole 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plastid, vacuole
Any Predictor:cytosol, plastid, vacuole
BaCelLo:cytosol
iPSORT:mitochondrion
MultiLoc:vacuole
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY24810 Canola cytosol 95.27 95.27
CDX75502 Canola cytosol, extracellular, plastid 93.06 92.48
CDX69139 Canola cytosol, extracellular, plastid 92.74 92.16
AT4G35420.1 Thale cress extracellular 91.17 88.65
VIT_03s0038g04220.t01 Wine grape endoplasmic reticulum 75.71 74.3
PGSC0003DMT400065107 Potato cytosol 70.35 66.57
Solyc04g008780.2.1 Tomato cytosol 70.35 65.98
KRH09917 Soybean mitochondrion 68.14 65.06
KRH23414 Soybean mitochondrion 67.51 64.65
VIT_03s0038g04230.t01 Wine grape cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 49.84 62.95
GSMUA_AchrUn_... Banana cytosol 63.72 62.15
EER99113 Sorghum mitochondrion 63.72 61.4
TraesCS7B01G141100.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 63.09 60.79
Os08t0515900-01 Rice cytosol 56.47 60.68
TraesCS7D01G248800.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 62.78 60.49
Zm00001d020970_P001 Maize cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 63.09 60.42
EES14250 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 61.51 58.21
TraesCS5B01G271500.1 Wheat mitochondrion 61.51 56.03
TraesCS5A01G271200.1 Wheat mitochondrion 61.51 56.03
TraesCS5D01G278800.1 Wheat mitochondrion 61.2 55.75
Os09t0493500-02 Rice plastid 61.51 53.28
TraesCS7A01G250100.1 Wheat cytosol, mitochondrion, plastid 62.78 52.93
CDX69634 Canola cytosol 47.0 46.42
Zm00001d031488_P002 Maize cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 50.16 46.36
CDY38590 Canola cytosol 46.37 45.79
CDX96012 Canola cytosol, nucleus, peroxisome 46.06 45.48
CDY14000 Canola cytosol 46.37 45.09
CDX92530 Canola cytosol 46.37 44.55
CDY43911 Canola cytosol 44.8 43.69
CDY22576 Canola cytosol 44.48 43.38
CDY65726 Canola cytosol 44.16 43.08
CDY03618 Canola cytosol 44.16 43.08
CDY35052 Canola cytosol 37.22 42.75
CDX84988 Canola cytosol 41.01 42.62
CDX84989 Canola cytosol 42.9 42.37
CDY42105 Canola cytosol, plastid 42.9 42.37
CDY68009 Canola cytosol, endoplasmic reticulum, golgi 42.27 41.61
CDY45844 Canola cytosol, golgi, peroxisome 42.27 41.23
CDY72415 Canola cytosol, endoplasmic reticulum, peroxisome 41.64 40.62
CDX94965 Canola golgi 41.32 40.31
CDY64747 Canola extracellular, golgi, mitochondrion, plastid 40.38 39.51
CDX94968 Canola endoplasmic reticulum, golgi, plastid 40.38 39.26
CDY42108 Canola cytosol 29.02 39.15
CDX94967 Canola plasma membrane 39.75 39.13
CDY57397 Canola cytosol, endoplasmic reticulum, peroxisome 39.75 39.01
CDY32979 Canola cytosol, endoplasmic reticulum, peroxisome 39.75 39.01
CDX81743 Canola cytosol 41.64 38.82
CDY52857 Canola cytosol 41.96 38.78
CDX94966 Canola golgi, mitochondrion, peroxisome, plastid 39.12 38.51
CDY33365 Canola cytosol 41.64 38.48
CDY63972 Canola cytosol 40.06 38.37
CDX87345 Canola cytosol 40.06 38.25
CDY39941 Canola cytosol 40.06 38.25
CDY64860 Canola cytosol 39.75 38.07
CDY09372 Canola cytosol 35.33 34.89
CDY15830 Canola cytosol 35.02 34.58
CDY64748 Canola cytosol 40.06 33.96
Protein Annotations
KEGG:00040+1.1.1.-KEGG:00051+1.1.1.-KEGG:00140+1.1.1.-KEGG:00240+1.1.1.-KEGG:00253+1.1.1.-KEGG:00362+1.1.1.-
KEGG:00363+1.1.1.-KEGG:00365+1.1.1.-KEGG:00400+1.1.1.-KEGG:00520+1.1.1.-KEGG:00523+1.1.1.-KEGG:00591+1.1.1.-
KEGG:00622+1.1.1.-KEGG:00625+1.1.1.-KEGG:00633+1.1.1.-KEGG:00640+1.1.1.-KEGG:00650+1.1.1.-KEGG:00680+1.1.1.-
KEGG:00720+1.1.1.-KEGG:00750+1.1.1.-KEGG:00830+1.1.1.-KEGG:00950+1.1.1.-KEGG:00966+1.1.1.-KEGG:00981+1.1.1.-
MapMan:21.8.1.5Gene3D:3.40.50.720GO:A0A078HVC1UniProt:A0A078HVC1EnsemblPlants:CDY41656ProteinID:CDY41656
ProteinID:CDY41656.1InterPro:Epimerase_deHydtaseGO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0007275
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009555GO:GO:0009653GO:GO:0009987
GO:GO:0016043GO:GO:0050662GO:GO:0080110EnsemblPlantsGene:GSBRNA2T00073324001InterPro:NAD(P)-bd_dom_sfPFAM:PF01370
PANTHER:PTHR10366PANTHER:PTHR10366:SF493SUPFAM:SSF51735InterPro:TKPR1UniParc:UPI0004EDF4C9SEG:seg
Description
BnaC03g62280DBnaC03g62280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HVC1]
Coordinates
chrLK032502:+:210058..211595
Molecular Weight (calculated)
35462.5 Da
IEP (calculated)
5.633
GRAVY (calculated)
-0.138
Length
317 amino acids
Sequence
(BLAST)
001: MDQTKGKVCV TGASGFLASW LVKRLLIEGY EVTGTVRDPG NEKKAAHLWK LEGAKERLRL VEADLMEDGS FDNAIMGCHG VFHTASPEEI LKPAIEGTLN
101: VLRSCRKNQS LKRVVLTSSS STVRIRDDFD PNIPLDESVW TSVELCKRFQ VWYALSKTLA EQAAWKFCEE NGLDLVTVLP SFLVGPSLPP DLCSTASDVL
201: GLLKGETEKF QWHGQMGYVH IDDVARTHIL VFEQEAAQGR YICSSKVVSL EELVSFLSTS YPSLPVPKRF EKLNRLHYEF DTSKIESLGL KFKTLEEMFD
301: DCIASFVEQG HLSHVVS
Best Arabidopsis Sequence Match ( AT4G35420.1 )
(BLAST)
001: MDQAKGKVCV TGASGFLASW LVKRLLLEGY EVIGTVRDPG NEKKLAHLWK LEGAKERLRL VKADLMEEGS FDNAIMGCQG VFHTASPVLK PTSNPEEEIL
101: RPAIEGTLNV LRSCRKNPSL KRVVLTSSSS TVRIRDDFDP KIPLDESIWT SVELCKRFQV WYALSKTLAE QAAWKFSEEN GIDLVTVLPS FLVGPSLPPD
201: LCSTASDVLG LLKGETEKFQ WHGQMGYVHI DDVARTHIVV FEHEAAQGRY ICSSNVISLE ELVSFLSARY PSLPIPKRFE KLNRLHYDFD TSKIQSLGLK
301: FKSLEEMFDD CIASLVEQGY LSTVLP
Arabidopsis Description
TKPR1Tetraketide alpha-pyrone reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q500U8]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.