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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, peroxisome
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY64860 Canola cytosol 98.49 98.49
AT1G80820.1 Thale cress cytosol, endoplasmic reticulum, peroxisome 96.37 96.08
CDX87345 Canola cytosol 96.07 95.78
CDY39941 Canola cytosol 95.17 94.88
CDY35052 Canola cytosol 69.49 83.33
CDY33365 Canola cytosol 84.59 81.63
CDX81743 Canola cytosol 83.38 81.18
CDY52857 Canola cytosol 83.99 81.05
PGSC0003DMT400051049 Potato endoplasmic reticulum, peroxisome, plastid 75.83 75.6
VIT_09s0070g00240.t01 Wine grape cytosol 75.53 73.96
Solyc03g116910.2.1 Tomato endoplasmic reticulum, peroxisome, plastid 74.02 73.8
PGSC0003DMT400073398 Potato cytosol, endoplasmic reticulum, mitochondrion, plastid 73.41 73.19
Solyc06g068440.2.1 Tomato cytosol, endoplasmic reticulum, mitochondrion, plastid 73.41 73.19
KRH09656 Soybean cytosol 72.51 71.43
KRH47350 Soybean cytosol 71.0 70.78
KRH44552 Soybean cytosol 70.69 70.27
KRH23636 Soybean cytosol 71.6 70.12
GSMUA_Achr5P04460_001 Banana cytosol, peroxisome, plastid 67.37 66.37
TraesCS5A01G225100.3 Wheat cytosol, plastid 68.58 65.23
TraesCS7D01G150500.1 Wheat cytosol 67.07 65.1
GSMUA_Achr11P... Banana plastid 65.26 64.86
HORVU7Hr1G030380.2 Barley cytosol 66.47 64.52
TraesCS5D01G232400.1 Wheat cytosol, peroxisome, plastid 68.28 64.39
TraesCS7A01G149000.1 Wheat cytosol 67.07 64.35
GSMUA_Achr11P... Banana cytosol 64.95 64.18
EER89338 Sorghum cytosol 66.77 63.87
TraesCS5B01G223700.2 Wheat cytosol 68.88 63.87
TraesCS7D01G150600.1 Wheat cytosol 66.16 63.85
Zm00001d045101_P001 Maize cytosol 64.65 62.94
Zm00001d019669_P001 Maize cytosol 64.65 62.76
HORVU7Hr1G022220.4 Barley cytosol 64.35 62.65
OQU89100 Sorghum cytosol 64.95 62.14
Os09t0419200-01 Rice cytosol 66.77 61.9
Os08t0441500-01 Rice cytosol, peroxisome, plastid 67.37 61.77
Os09t0127300-01 Rice cytosol 63.44 60.52
HORVU0Hr1G013070.1 Barley cytosol 62.54 60.35
HORVU5Hr1G065330.5 Barley cytosol, peroxisome, plastid 68.58 60.05
EES15061 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 67.07 59.36
HORVU5Hr1G050940.1 Barley cytosol 64.05 59.22
TraesCS5A01G163400.1 Wheat cytosol 63.44 58.82
TraesCS7B01G052700.1 Wheat plastid 65.56 58.81
TraesCS5D01G168400.1 Wheat cytosol 63.14 58.54
TraesCS5D01G073300.1 Wheat cytosol 58.91 58.04
TraesCS5A01G061600.1 Wheat cytosol, mitochondrion, peroxisome 58.61 57.74
TraesCS5B01G069600.1 Wheat cytosol, mitochondrion, peroxisome 58.61 57.74
TraesCS5B01G160700.1 Wheat cytosol 63.44 57.53
TraesCS5B01G069500.1 Wheat cytosol 58.61 57.23
Os08t0277200-01 Rice plastid 58.91 57.02
TraesCS5D01G073400.1 Wheat cytosol 58.31 56.93
TraesCS7B01G052600.1 Wheat cytosol 67.37 56.74
TraesCS5A01G061700.1 Wheat cytosol 57.4 56.05
Zm00001d050417_P001 Maize cytosol 61.03 55.65
TraesCS6D01G136600.2 Wheat extracellular, vacuole 56.8 54.65
Zm00001d032152_P001 Maize cytosol 67.07 54.41
Os02t0180700-01 Rice extracellular 56.19 54.07
EES04640 Sorghum golgi, plastid 55.59 53.64
Zm00001d015513_P001 Maize golgi, peroxisome, plastid, vacuole 55.89 53.47
HORVU6Hr1G028980.18 Barley endoplasmic reticulum, extracellular 55.59 53.33
HORVU5Hr1G016690.3 Barley cytosol 55.89 51.25
HORVU5Hr1G016620.2 Barley cytosol 55.59 51.11
TraesCS6B01G175600.2 Wheat plastid 57.1 49.35
CDY14000 Canola cytosol 48.04 48.77
CDX92530 Canola cytosol 48.04 48.18
CDY22576 Canola cytosol 47.13 48.0
CDY03618 Canola cytosol 46.83 47.69
CDY65726 Canola cytosol 46.83 47.69
CDY43911 Canola cytosol 46.53 47.38
TraesCS5A01G061800.1 Wheat cytosol 39.88 47.31
CDY72415 Canola cytosol, endoplasmic reticulum, peroxisome 43.81 44.62
CDY68009 Canola cytosol, endoplasmic reticulum, golgi 43.2 44.41
CDY64747 Canola extracellular, golgi, mitochondrion, plastid 43.2 44.14
CDX94966 Canola golgi, mitochondrion, peroxisome, plastid 42.9 44.1
CDY45844 Canola cytosol, golgi, peroxisome 43.2 44.0
TraesCS6A01G147300.1 Wheat cytosol, endoplasmic reticulum, peroxisome 56.5 43.9
CDX94968 Canola endoplasmic reticulum, golgi, plastid 43.2 43.87
CDX94967 Canola plasma membrane 42.6 43.79
CDX94965 Canola golgi 42.3 43.08
CDY32979 Canola cytosol, endoplasmic reticulum, peroxisome 41.99 43.03
CDY57397 Canola cytosol, endoplasmic reticulum, peroxisome 41.99 43.03
CDY38590 Canola cytosol 39.88 41.12
CDX69634 Canola cytosol 39.58 40.81
CDX75502 Canola cytosol, extracellular, plastid 38.67 40.13
CDX69139 Canola cytosol, extracellular, plastid 38.67 40.13
CDY24810 Canola cytosol 38.37 40.06
CDY41656 Canola cytosol, plastid, vacuole 38.37 40.06
CDX96012 Canola cytosol, nucleus, peroxisome 38.67 39.88
CDY09372 Canola cytosol 37.46 38.63
CDY64748 Canola cytosol 43.5 38.5
CDY15830 Canola cytosol 36.56 37.69
CDY42105 Canola cytosol, plastid 35.65 36.76
CDX84989 Canola cytosol 35.35 36.45
CDX84988 Canola cytosol 31.12 33.77
CDY42108 Canola cytosol 20.54 28.94
HORVU5Hr1G016670.3 Barley plastid 1.21 9.52
Protein Annotations
EnsemblPlants:CDY63972EnsemblPlantsGene:GSBRNA2T00040758001Gene3D:3.40.50.720GO:G0WXK6GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0050662InterPro:Epimerase_deHydtaseInterPro:NAD(P)-bd_dom_sfPANTHER:PTHR10366PANTHER:PTHR10366:SF404
PFAM:PF01370ProteinID:AEK27156.1ProteinID:CDY63972ProteinID:CDY63972.1SEG:segSUPFAM:SSF51735
UniParc:UPI00021B0941UniProt:G0WXK6MapMan:21.6.1.5:::
Description
BnaC02g46610DBnaC02g46610D protein [Source:UniProtKB/TrEMBL;Acc:G0WXK6]
Coordinates
chrLK034379:-:18155..19880
Molecular Weight (calculated)
36417.8 Da
IEP (calculated)
7.149
GRAVY (calculated)
-0.182
Length
331 amino acids
Sequence
(BLAST)
001: MPADGKLVCV TGAGGYIASW IVKLLLERGY TVRGTVRNPA DPKNNHLREL QGAKERLTLH SADLLDYEAL SATIDGCDGV FHTASPMTDD PETMLEPAVN
101: GAKFVIDAAA KAKVKRVVFT SSIGAVYMNP NRDPQTIVDE SCWSDLDFCK NTKNWYCYGK MVAEQSAWET AKAKGVDLVV LNPVLVLGPP LQSAVNASLV
201: HILKYLTGSA KTYANLTQVY VDVRDVALGH VMVYESPSAS GRYILAETAL HRGEVVEILA KFFPEYPLPI KCSDEKNPRA KPYKFTTQKI KDLGLEFKPI
301: KQSLYESVKS LQEKGHLPLP QDSNQNVIIE S
Best Arabidopsis Sequence Match ( AT1G80820.1 )
(BLAST)
001: MLVDGKLVCV TGAGGYIASW IVKLLLERGY TVRGTVRNPT DPKNNHLREL QGAKERLTLH SADLLDYEAL CATIDGCDGV FHTASPMTDD PETMLEPAVN
101: GAKFVIDAAA KAKVKRVVFT SSIGAVYMNP NRDTQAIVDE NCWSDLDFCK NTKNWYCYGK MLAEQSAWET AKAKGVDLVV LNPVLVLGPP LQSAINASLV
201: HILKYLTGSA KTYANLTQVY VDVRDVALGH VLVYEAPSAS GRYILAETAL HRGEVVEILA KFFPEYPLPT KCSDEKNPRA KPYKFTTQKI KDLGLEFKPI
301: KQSLYESVKS LQEKGHLPLP QDSNQNEVII ES
Arabidopsis Description
CCR2Cinnamoyl-CoA reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAH9]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.