Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G225100.3 | Wheat | cytosol, plastid | 86.01 | 84.77 |
| TraesCS5D01G232400.1 | Wheat | cytosol, peroxisome, plastid | 86.01 | 84.05 |
| TraesCS5B01G223700.2 | Wheat | cytosol | 86.3 | 82.91 |
| HORVU5Hr1G065330.5 | Barley | cytosol, peroxisome, plastid | 90.38 | 82.01 |
| Os09t0419200-01 | Rice | cytosol | 79.59 | 76.47 |
| GSMUA_Achr5P04460_001 | Banana | cytosol, peroxisome, plastid | 69.68 | 71.13 |
| GSMUA_Achr11P... | Banana | cytosol | 68.51 | 70.15 |
| HORVU7Hr1G022220.4 | Barley | cytosol | 68.51 | 69.12 |
| HORVU7Hr1G030380.2 | Barley | cytosol | 68.51 | 68.92 |
| VIT_09s0070g00240.t01 | Wine grape | cytosol | 67.06 | 68.05 |
| CDY35052 | Canola | cytosol | 54.23 | 67.39 |
| KRH09656 | Soybean | cytosol | 65.01 | 66.37 |
| PGSC0003DMT400051049 | Potato | endoplasmic reticulum, peroxisome, plastid | 64.14 | 66.27 |
| PGSC0003DMT400073398 | Potato | cytosol, endoplasmic reticulum, mitochondrion, plastid | 63.85 | 65.96 |
| Solyc03g116910.2.1 | Tomato | endoplasmic reticulum, peroxisome, plastid | 63.56 | 65.66 |
| Solyc06g068440.2.1 | Tomato | cytosol, endoplasmic reticulum, mitochondrion, plastid | 63.27 | 65.36 |
| KRH47350 | Soybean | cytosol | 62.68 | 64.76 |
| Bra026737.1-P | Field mustard | cytosol | 64.72 | 64.72 |
| CDY52857 | Canola | cytosol | 64.72 | 64.72 |
| CDX81743 | Canola | cytosol | 64.14 | 64.71 |
| Bra026090.1-P | Field mustard | cytosol | 64.14 | 64.52 |
| KRH44552 | Soybean | cytosol | 62.39 | 64.26 |
| CDY33365 | Canola | cytosol | 64.14 | 64.14 |
| KRH23636 | Soybean | cytosol | 62.68 | 63.61 |
| AT1G15950.1 | Thale cress | cytosol | 63.56 | 63.37 |
| CDY63972 | Canola | cytosol | 60.35 | 62.54 |
| Bra035150.1-P | Field mustard | cytosol | 60.35 | 62.35 |
| CDX87345 | Canola | cytosol | 60.35 | 62.35 |
| CDY64860 | Canola | cytosol | 60.06 | 62.24 |
| Bra008438.1-P | Field mustard | cytosol | 60.06 | 62.24 |
| AT1G80820.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 60.06 | 62.05 |
| CDY39941 | Canola | cytosol | 60.06 | 62.05 |
| HORVU5Hr1G050940.1 | Barley | cytosol | 58.6 | 56.15 |
| HORVU6Hr1G028980.18 | Barley | endoplasmic reticulum, extracellular | 52.19 | 51.88 |
| HORVU5Hr1G016620.2 | Barley | cytosol | 51.31 | 48.89 |
| HORVU5Hr1G016690.3 | Barley | cytosol | 51.31 | 48.75 |
| HORVU6Hr1G089460.2 | Barley | cytosol | 48.69 | 46.78 |
| HORVU6Hr1G089350.2 | Barley | cytosol, peroxisome | 48.4 | 45.11 |
| HORVU6Hr1G089340.1 | Barley | mitochondrion | 50.15 | 44.56 |
| HORVU3Hr1G088020.2 | Barley | cytosol | 37.03 | 38.84 |
| HORVU5Hr1G122150.1 | Barley | plastid | 40.52 | 38.61 |
| HORVU4Hr1G085100.1 | Barley | cytosol | 38.19 | 35.22 |
| HORVU5Hr1G112340.7 | Barley | cytosol, plastid | 38.48 | 35.2 |
| HORVU3Hr1G004270.1 | Barley | mitochondrion | 23.62 | 33.75 |
| HORVU5Hr1G016670.3 | Barley | plastid | 1.46 | 11.9 |
Protein Annotations
| EnsemblPlants:HORVU0Hr1G013070.1 | EnsemblPlantsGene:HORVU0Hr1G013070 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0050662 | InterPro:Epimerase_deHydtase | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF404 | PFAM:PF01370 |
| SEG:seg | SUPFAM:SSF51735 | UniParc:UPI000B464072 | UniProt:A0A287E0R0 | MapMan:21.6.1.5 | : |
Description
No Description!
Coordinates
chrchrUn:+:75290171..75303629
Molecular Weight (calculated)
35711.6 Da
IEP (calculated)
6.912
GRAVY (calculated)
-0.164
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: TTGCKVGGCS TDLPSIALAG VGKGAYTVKG TVRNPDDPKN AHLKALDGAA ERLVLCKADL LDYDAICAAV EGCHGVFHTA SPVTDDPEQM VEPAVRGTEY
101: VIDAAADAGT VRRVVFTSSI GAVTMDPNRG PDVVVDESCW SDLEFCKKTK NWYCYGKAVA EQAAWEKARA RGVDLVVVNP VLVVGPLLQP TVNASAAHIL
201: KYLDGSARKY ANAVQAYVDV RDVXXXXXXX XXXXXAGAHL RVFEAPQASG RYLCAERVLH RQDVVHILAK LFPEYPVPTR CSDEVNPRKQ PYKMSNQKLQ
301: DLGLKFTPVN DSLYETVKSL QEKGHLPVPR KDILAPQLDG ATA
101: VIDAAADAGT VRRVVFTSSI GAVTMDPNRG PDVVVDESCW SDLEFCKKTK NWYCYGKAVA EQAAWEKARA RGVDLVVVNP VLVVGPLLQP TVNASAAHIL
201: KYLDGSARKY ANAVQAYVDV RDVXXXXXXX XXXXXAGAHL RVFEAPQASG RYLCAERVLH RQDVVHILAK LFPEYPVPTR CSDEVNPRKQ PYKMSNQKLQ
301: DLGLKFTPVN DSLYETVKSL QEKGHLPVPR KDILAPQLDG ATA
001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS
Arabidopsis Description
CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.