Factsheet for HORVU6Hr1G089460.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G366400.1	Wheat	cytosol	79.27	84.98
TraesCS6A01G381700.1	Wheat	golgi, mitochondrion	82.91	78.51
EES05992	Sorghum	cytosol	67.79	73.11
Os02t0811400-00	Rice	cytosol	68.91	73.0
Os02t0808800-01	Rice	cytosol	68.63	72.49
OQU85928	Sorghum	cytosol	68.91	71.72
Os02t0811800-01	Rice	cytosol	63.59	66.96
Zm00001d051938_P002	Maize	cytosol	68.63	66.22
HORVU6Hr1G089340.1	Barley	mitochondrion	71.43	66.06
HORVU6Hr1G089350.2	Barley	cytosol, peroxisome	66.11	64.13
Os02t0811600-00	Rice	cytosol	50.42	61.43
HORVU7Hr1G030380.2	Barley	cytosol	51.82	54.25
HORVU7Hr1G022220.4	Barley	cytosol	51.26	53.82
HORVU0Hr1G013070.1	Barley	cytosol	46.78	48.69
HORVU5Hr1G065330.5	Barley	cytosol, peroxisome, plastid	51.26	48.41
HORVU6Hr1G028980.18	Barley	endoplasmic reticulum, extracellular	45.66	47.25
HORVU5Hr1G050940.1	Barley	cytosol	47.34	47.21
HORVU5Hr1G016690.3	Barley	cytosol	45.38	44.88
HORVU5Hr1G016620.2	Barley	cytosol	45.1	44.72
HORVU5Hr1G122150.1	Barley	plastid	38.1	37.78
HORVU3Hr1G088020.2	Barley	cytosol	34.45	37.61
HORVU4Hr1G085100.1	Barley	cytosol	37.82	36.29
HORVU5Hr1G112340.7	Barley	cytosol, plastid	37.53	35.73
HORVU3Hr1G004270.1	Barley	mitochondrion	20.17	30.0
HORVU5Hr1G016670.3	Barley	plastid	1.12	9.52

Protein Annotations

EnsemblPlants:HORVU6Hr1G089460.2	EnsemblPlantsGene:HORVU6Hr1G089460	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF353	PFAM:PF01370
SEG:seg	SUPFAM:SSF51735	UniParc:UPI000B46DF85	UniProt:A0A287V4E3	MapMan:21.6.1.5	:

Description

No Description!

Coordinates

chrchr6H:-:569738862..569740213

Molecular Weight (calculated)

38800.2 Da

IEP (calculated)

7.032

GRAVY (calculated)

-0.148

Length

357 amino acids

Sequence
(BLAST)

001: LTLSTITMQS SSSSKAGGNG DEGHLVCVTG AGSFIGSWVV KELLLRGYRV RGTARDPANR KNAHLLELDG AGERLTLCCA DVMDADGLRA AFRGCRGVFH
101: VASPVSNDPE LVPEAVEGTR NVINAAADAG VRRVVFTSSY GAVHMDPSRS PDAVVDEACW SDYDYCKRTG NLYCCAKMMA EVAATEEAGR RGLELAVVVP
201: ATTIGPALQQ TLNFSTDHVA RYLTGAKPAY QNAVTAYVDV RDVARAHALV YQHPDARGRR YLCVAAVLHR ANFVGLLRDL YPQYPVTARC EDDGKPMARE
301: YRFSNQRLRD LGLEFTDMRT SLYETVICLQ HEXACPCHRA TSSCMLVKSI CTHVELD

Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)

001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS

Arabidopsis Description

CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.