Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- golgi 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G168400.1 | Wheat | cytosol | 97.49 | 97.76 |
| TraesCS5A01G163400.1 | Wheat | cytosol | 96.37 | 96.64 |
| TraesCS5B01G160700.1 | Wheat | cytosol | 95.53 | 93.7 |
| OQU89100 | Sorghum | cytosol | 80.17 | 82.95 |
| Zm00001d019669_P001 | Maize | cytosol | 78.77 | 82.7 |
| Os09t0127300-01 | Rice | cytosol | 77.09 | 79.54 |
| GSMUA_Achr11P... | Banana | plastid | 63.97 | 68.77 |
| PGSC0003DMT400051049 | Potato | endoplasmic reticulum, peroxisome, plastid | 63.69 | 68.67 |
| Solyc03g116910.2.1 | Tomato | endoplasmic reticulum, peroxisome, plastid | 63.69 | 68.67 |
| Solyc06g068440.2.1 | Tomato | cytosol, endoplasmic reticulum, mitochondrion, plastid | 62.01 | 66.87 |
| PGSC0003DMT400073398 | Potato | cytosol, endoplasmic reticulum, mitochondrion, plastid | 61.45 | 66.27 |
| CDY35052 | Canola | cytosol | 50.84 | 65.94 |
| KRH44552 | Soybean | cytosol | 60.89 | 65.47 |
| KRH47350 | Soybean | cytosol | 60.06 | 64.76 |
| CDY63972 | Canola | cytosol | 59.22 | 64.05 |
| CDY64860 | Canola | cytosol | 59.22 | 64.05 |
| Bra008438.1-P | Field mustard | cytosol | 59.22 | 64.05 |
| KRH09656 | Soybean | cytosol | 60.06 | 63.99 |
| Bra026090.1-P | Field mustard | cytosol | 60.61 | 63.64 |
| VIT_09s0070g00240.t01 | Wine grape | cytosol | 60.06 | 63.61 |
| CDX87345 | Canola | cytosol | 58.94 | 63.55 |
| Bra035150.1-P | Field mustard | cytosol | 58.94 | 63.55 |
| CDX81743 | Canola | cytosol | 60.34 | 63.53 |
| Bra026737.1-P | Field mustard | cytosol | 60.61 | 63.27 |
| AT1G80820.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 58.66 | 63.25 |
| CDY33365 | Canola | cytosol | 60.34 | 62.97 |
| CDY52857 | Canola | cytosol | 60.34 | 62.97 |
| CDY39941 | Canola | cytosol | 58.38 | 62.95 |
| AT1G15950.1 | Thale cress | cytosol | 60.06 | 62.5 |
| HORVU7Hr1G030380.2 | Barley | cytosol | 59.22 | 62.17 |
| KRH23636 | Soybean | cytosol | 58.38 | 61.83 |
| HORVU7Hr1G022220.4 | Barley | cytosol | 57.54 | 60.59 |
| HORVU6Hr1G028980.18 | Barley | endoplasmic reticulum, extracellular | 57.82 | 60.0 |
| HORVU5Hr1G065330.5 | Barley | cytosol, peroxisome, plastid | 62.01 | 58.73 |
| HORVU0Hr1G013070.1 | Barley | cytosol | 56.15 | 58.6 |
| HORVU5Hr1G016690.3 | Barley | cytosol | 55.59 | 55.12 |
| HORVU5Hr1G016620.2 | Barley | cytosol | 55.31 | 55.0 |
| HORVU6Hr1G089460.2 | Barley | cytosol | 47.21 | 47.34 |
| HORVU6Hr1G089350.2 | Barley | cytosol, peroxisome | 46.93 | 45.65 |
| HORVU6Hr1G089340.1 | Barley | mitochondrion | 48.6 | 45.08 |
| HORVU5Hr1G122150.1 | Barley | plastid | 40.22 | 40.0 |
| HORVU3Hr1G088020.2 | Barley | cytosol | 36.31 | 39.76 |
| HORVU4Hr1G085100.1 | Barley | cytosol | 40.5 | 38.98 |
| HORVU3Hr1G004270.1 | Barley | mitochondrion | 22.63 | 33.75 |
| HORVU5Hr1G112340.7 | Barley | cytosol, plastid | 34.92 | 33.33 |
| HORVU5Hr1G016670.3 | Barley | plastid | 1.68 | 14.29 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G050940.1 | EnsemblPlantsGene:HORVU5Hr1G050940 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0050662 | InterPro:Epimerase_deHydtase | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF552 | PFAM:PF01370 |
| SEG:seg | SUPFAM:SSF51735 | UniParc:UPI000294A7F1 | UniProt:M0XCA6 | MapMan:21.6.1.5 | : |
Description
No Description!
Coordinates
chrchr5H:+:397332346..397334961
Molecular Weight (calculated)
39619.8 Da
IEP (calculated)
6.841
GRAVY (calculated)
-0.235
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MPIETTDNVP AADLPGHGRT VCVTGAGGFI ASWLVKRLLQ KGYTVRGTVR NPVDPKNDHL RAFDGAADRL VLLRADLMEP ETLVEAFTGC EGIFHAASPV
101: TDDPEKMIEP AIRGTKYVIT AAADMGIKRV VFTSTIGTVY MNPHRDPSKP VDDTCWSDLD YCKKTANWYC YAKTVAEQDA LETARQRGIE LVVVNPVLVL
201: GPLLQPTVNA STEHVMKYLT GSAKTYVNAA QAYVHVKDVA EAHVRVYEAP DAHGRYICAE GTTLHRGELC RVLGKLFPEY PVPTKCKDEV NPPVKGYKFT
301: NQRLKDLGME FVPVLQSIYE TVKSLQEKGM LPVLPPSDDV RDNMHEQLIM KPAQLLRN
101: TDDPEKMIEP AIRGTKYVIT AAADMGIKRV VFTSTIGTVY MNPHRDPSKP VDDTCWSDLD YCKKTANWYC YAKTVAEQDA LETARQRGIE LVVVNPVLVL
201: GPLLQPTVNA STEHVMKYLT GSAKTYVNAA QAYVHVKDVA EAHVRVYEAP DAHGRYICAE GTTLHRGELC RVLGKLFPEY PVPTKCKDEV NPPVKGYKFT
301: NQRLKDLGME FVPVLQSIYE TVKSLQEKGM LPVLPPSDDV RDNMHEQLIM KPAQLLRN
001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS
Arabidopsis Description
CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.