Factsheet for TraesCS5A01G163400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G168400.1	Wheat	cytosol	98.04	98.04
HORVU5Hr1G050940.1	Barley	cytosol	96.64	96.37
TraesCS5B01G160700.1	Wheat	cytosol	97.48	95.34
OQU89100	Sorghum	cytosol	80.95	83.53
Zm00001d019669_P001	Maize	cytosol	78.99	82.7
Os09t0127300-01	Rice	cytosol	77.03	79.25
GSMUA_Achr11P...	Banana	plastid	63.59	68.17
Solyc03g116910.2.1	Tomato	endoplasmic reticulum, peroxisome, plastid	63.31	68.07
PGSC0003DMT400051049	Potato	endoplasmic reticulum, peroxisome, plastid	63.31	68.07
Solyc06g068440.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plastid	61.34	65.96
PGSC0003DMT400073398	Potato	cytosol, endoplasmic reticulum, mitochondrion, plastid	61.34	65.96
CDY35052	Canola	cytosol	50.98	65.94
KRH44552	Soybean	cytosol	60.78	65.17
KRH47350	Soybean	cytosol	59.94	64.46
TraesCS5A01G225100.3	Wheat	cytosol, plastid	62.75	64.37
KRH09656	Soybean	cytosol	60.22	63.99
VIT_09s0070g00240.t01	Wine grape	cytosol	60.5	63.91
Bra026090.1-P	Field mustard	cytosol	60.78	63.64
CDY64860	Canola	cytosol	58.82	63.44
CDY63972	Canola	cytosol	58.82	63.44
Bra008438.1-P	Field mustard	cytosol	58.82	63.44
Bra026737.1-P	Field mustard	cytosol	60.78	63.27
CDX81743	Canola	cytosol	60.22	63.24
CDY52857	Canola	cytosol	60.5	62.97
CDY33365	Canola	cytosol	60.5	62.97
CDX87345	Canola	cytosol	58.54	62.95
Bra035150.1-P	Field mustard	cytosol	58.54	62.95
AT1G80820.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	58.26	62.65
CDY39941	Canola	cytosol	57.98	62.35
AT1G15950.1	Thale cress	cytosol	59.94	62.21
KRH23636	Soybean	cytosol	58.26	61.54
TraesCS5A01G061600.1	Wheat	cytosol, mitochondrion, peroxisome	57.7	61.31
TraesCS7A01G149000.1	Wheat	cytosol	59.1	61.16
TraesCS5A01G061700.1	Wheat	cytosol	57.42	60.47
TraesCS5A01G061800.1	Wheat	cytosol	42.02	53.76
TraesCS6A01G381400.1	Wheat	cytosol	49.58	51.3
TraesCS5A01G410400.1	Wheat	cytosol	47.62	50.3
TraesCS6A01G380800.1	Wheat	cytosol	47.34	49.71
TraesCS5A01G410100.1	Wheat	cytosol	45.66	48.66
TraesCS6A01G147300.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	57.7	48.36
TraesCS6A01G381100.1	Wheat	cytosol	37.25	47.67
TraesCS4A01G331600.1	Wheat	cytosol, golgi, plastid	28.57	46.79
TraesCS6A01G381700.1	Wheat	golgi, mitochondrion	48.74	46.15
TraesCS4A01G331900.2	Wheat	golgi, unclear	40.34	43.64
TraesCS6A01G380900.1	Wheat	cytosol	46.78	43.49
TraesCS5A01G517000.1	Wheat	mitochondrion	40.34	39.89
TraesCS3A01G046700.1	Wheat	cytosol	35.57	38.6
TraesCS3A01G348600.1	Wheat	cytosol	35.29	38.41
TraesCS5A01G271200.1	Wheat	mitochondrion	36.41	37.36
TraesCS5A01G473600.1	Wheat	cytosol	34.45	37.27
TraesCS7A01G250100.1	Wheat	cytosol, mitochondrion, plastid	36.69	34.84

Protein Annotations

EnsemblPlants:TraesCS5A01G163400.1	EnsemblPlantsGene:TraesCS5A01G163400	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF552	PFAM:PF01370
SEG:seg	SUPFAM:SSF51735	TIGR:cd08958	MapMan:21.6.1.5	:	:

Description

No Description!

Coordinates

chr5A:-:350236147..350238142

Molecular Weight (calculated)

39478.7 Da

IEP (calculated)

6.977

GRAVY (calculated)

-0.219

Length

357 amino acids

Sequence
(BLAST)

001: MPIEAADNVP AELPGHGRTV CVTGAGGFIA SWLVKRLLQK GYNVRGTVRN PVDPKNDHLR AFDGAADRLV LLRADLMEPE TLVEAFTGCE GIFHAASPVT
101: DDPEKMIEPA IRGTKYVITA AADMGIKRVV FTSTIGTVYM NPNRDPSKPV DDTCWSDLEY CKKTANWYCY AKTVAEQDAL ETARQRGIEL IVVNPVLVLG
201: PLLQPTVNAS TEHVMKYLTG SAKTYVNAAQ AYVHVKDVAE AHVRVYEAPG AHGRYICAEG TTLHRGELCR VLCKLFPEYP VPTKCKDEVN PPVKGYKFTN
301: QRLKDLGMEF VPVLQSIYET VKSLQEKGML PVLPPGDDVR DNLHEQLMMK PAQLLRN

Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)

001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS

Arabidopsis Description

CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.