Factsheet for TraesCS5A01G061600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol

Predictor Summary:

mitochondrion 3
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G073300.1	Wheat	cytosol	93.75	93.75
TraesCS5B01G069600.1	Wheat	cytosol, mitochondrion, peroxisome	93.15	93.15
TraesCS5A01G061700.1	Wheat	cytosol	89.88	89.09
TraesCS5A01G061800.1	Wheat	cytosol	65.18	78.49
HORVU5Hr1G016620.2	Barley	cytosol	81.85	76.39
HORVU5Hr1G016690.3	Barley	cytosol	81.85	76.18
Os08t0277200-01	Rice	plastid	74.4	73.1
CDY35052	Canola	cytosol	54.17	65.94
PGSC0003DMT400073398	Potato	cytosol, endoplasmic reticulum, mitochondrion, plastid	63.1	63.86
Solyc06g068440.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plastid	62.8	63.55
GSMUA_Achr11P...	Banana	plastid	61.9	62.46
Solyc03g116910.2.1	Tomato	endoplasmic reticulum, peroxisome, plastid	61.61	62.35
PGSC0003DMT400051049	Potato	endoplasmic reticulum, peroxisome, plastid	61.61	62.35
VIT_09s0070g00240.t01	Wine grape	cytosol	62.5	62.13
KRH47350	Soybean	cytosol	61.01	61.75
KRH44552	Soybean	cytosol	61.01	61.56
KRH09656	Soybean	cytosol	60.71	60.71
TraesCS7A01G149000.1	Wheat	cytosol	61.61	60.0
Bra026090.1-P	Field mustard	cytosol	60.71	59.82
CDY33365	Canola	cytosol	60.71	59.48
CDX81743	Canola	cytosol	60.12	59.41
CDY52857	Canola	cytosol	60.42	59.18
Bra026737.1-P	Field mustard	cytosol	60.42	59.18
KRH23636	Soybean	cytosol	59.52	59.17
CDX87345	Canola	cytosol	58.33	59.04
Bra035150.1-P	Field mustard	cytosol	58.33	59.04
CDY64860	Canola	cytosol	58.04	58.91
Bra008438.1-P	Field mustard	cytosol	58.04	58.91
CDY39941	Canola	cytosol	58.04	58.73
AT1G15950.1	Thale cress	cytosol	60.12	58.72
TraesCS5A01G225100.3	Wheat	cytosol, plastid	60.71	58.62
CDY63972	Canola	cytosol	57.74	58.61
AT1G80820.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	57.44	58.13
TraesCS5A01G163400.1	Wheat	cytosol	61.31	57.7
TraesCS6A01G380800.1	Wheat	cytosol	48.81	48.24
TraesCS6A01G381400.1	Wheat	cytosol	49.4	48.12
TraesCS5A01G410100.1	Wheat	cytosol	46.73	46.87
TraesCS5A01G410400.1	Wheat	cytosol	47.02	46.75
TraesCS4A01G331600.1	Wheat	cytosol, golgi, plastid	30.06	46.33
TraesCS6A01G381100.1	Wheat	cytosol	38.39	46.24
TraesCS4A01G331900.2	Wheat	golgi, unclear	41.37	42.12
TraesCS6A01G380900.1	Wheat	cytosol	47.62	41.67
TraesCS6A01G381700.1	Wheat	golgi, mitochondrion	46.73	41.64
TraesCS6A01G147300.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	52.38	41.31
TraesCS5A01G473600.1	Wheat	cytosol	38.99	39.7
TraesCS3A01G046700.1	Wheat	cytosol	38.69	39.51
TraesCS3A01G348600.1	Wheat	cytosol	38.39	39.33
TraesCS5A01G517000.1	Wheat	mitochondrion	41.96	39.06
TraesCS5A01G271200.1	Wheat	mitochondrion	38.69	37.36
TraesCS7A01G250100.1	Wheat	cytosol, mitochondrion, plastid	38.39	34.31
HORVU5Hr1G016670.3	Barley	plastid	2.38	19.05

Protein Annotations

EnsemblPlants:TraesCS5A01G061600.1	EnsemblPlantsGene:TraesCS5A01G061600	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF380	PFAM:PF01370
SUPFAM:SSF51735	TIGR:cd08958	MapMan:21.6.1.5	:	:	:

Description

No Description!

Coordinates

chr5A:+:65010902..65012269

Molecular Weight (calculated)

36850.2 Da

IEP (calculated)

8.093

GRAVY (calculated)

-0.168

Length

336 amino acids

Sequence
(BLAST)

001: MGIDRVNTAA TGRGRTVCVT GAGGFIASWL VKLLLEKGYA VHGTVRNPDD MTRNAHLRAL EGATDRLTLF RVDLLDKESL IAAFQGCEGV FHTACPVTVD
101: PEKMIEPAVN GTRNLINAAA EVGSIRRVVM TSSIGAVYMD PRRTLDGKAD ETCWSDLEFC KNTKNWYCYA KTVAEQVAWE LAKERKLDLV VINPSLVLGP
201: LLQTAVNAST WHIAKYLDGS VQTYANTAQA YVHVQDVADA HTRAYETPDA HGRYLYAGRT LHRGEVCGIL AKFFPEYPVP TRCKEGAGEM KKGCRFSSRR
301: IMELGVGITP ASQCLYDTVT SLQDKGILPR RGADMS

Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)

001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS

Arabidopsis Description

CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.