Factsheet for TraesCS6A01G381700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion
Any Predictor:	cytosol, golgi, mitochondrion
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G366400.1	Wheat	cytosol	77.98	88.29
HORVU6Hr1G089460.2	Barley	cytosol	78.51	82.91
TraesCS6A01G381400.1	Wheat	cytosol	66.58	72.75
EES05992	Sorghum	cytosol	62.86	71.6
Os02t0811400-00	Rice	cytosol	63.66	71.22
Os02t0808800-01	Rice	cytosol	63.66	71.01
OQU85928	Sorghum	cytosol	63.66	69.97
TraesCS6A01G380800.1	Wheat	cytosol	61.8	68.53
TraesCS5A01G410400.1	Wheat	cytosol	60.48	67.46
TraesCS6A01G381100.1	Wheat	cytosol	49.87	67.38
TraesCS5A01G410100.1	Wheat	cytosol	59.42	66.87
Os02t0811800-01	Rice	cytosol	58.89	65.49
Zm00001d051938_P002	Maize	cytosol	63.13	64.32
Os02t0811600-00	Rice	cytosol	47.75	61.43
TraesCS6A01G380900.1	Wheat	cytosol	62.07	60.94
TraesCS5A01G225100.3	Wheat	cytosol, plastid	48.54	52.59
TraesCS7A01G149000.1	Wheat	cytosol	46.68	51.01
TraesCS5A01G163400.1	Wheat	cytosol	46.15	48.74
TraesCS5A01G061700.1	Wheat	cytosol	42.44	47.2
TraesCS5A01G061600.1	Wheat	cytosol, mitochondrion, peroxisome	41.64	46.73
TraesCS4A01G331600.1	Wheat	cytosol, golgi, plastid	24.67	42.66
TraesCS5A01G473600.1	Wheat	cytosol	36.07	41.21
TraesCS4A01G331900.2	Wheat	golgi, unclear	36.07	41.21
TraesCS6A01G147300.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	44.83	39.67
TraesCS5A01G061800.1	Wheat	cytosol	28.65	38.71
TraesCS3A01G348600.1	Wheat	cytosol	32.1	36.89
TraesCS3A01G046700.1	Wheat	cytosol	31.83	36.47
TraesCS5A01G517000.1	Wheat	mitochondrion	34.48	36.01
TraesCS5A01G271200.1	Wheat	mitochondrion	32.63	35.34
TraesCS7A01G250100.1	Wheat	cytosol, mitochondrion, plastid	31.57	31.65

Protein Annotations

EnsemblPlants:TraesCS6A01G381700.1	EnsemblPlantsGene:TraesCS6A01G381700	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF353	PFAM:PF01370
SUPFAM:SSF51735	TIGR:cd08958	MapMan:21.6.1.5	:	:	:

Description

No Description!

Coordinates

chr6A:-:601210633..601212044

Molecular Weight (calculated)

41588.1 Da

IEP (calculated)

8.751

GRAVY (calculated)

-0.148

Length

377 amino acids

Sequence
(BLAST)

001: MRAKAKLVEI RTGSRLILIC YCYLVLAHSR LCKQHPSTIT MQSSSKAGGN GDEEHLVCVT GAGSFIGSWV VKELLLRGYH VRGTARDPAG RKNVHLLALD
101: GAGERLTLCR ADVMHGDSLR AAFRGCRGVF HVASPVSNDP ELVPEAVEGT RTVVNAAADA GVRRLVFTSS YGAVHMDPNR SPDIVVDESC WSDYDYCKQT
201: GNLYCCAKMM AEVVAKEAAT KRGLELAVVV PATTIGPALQ QTLNFSSDHV ARYLTGAKPA YQNVVTAYID VRDVARAHTL VYEHPDARGH RYICVSAVLH
301: RAHFVRLLKD LYPQYPVTAK REDDGKPMAR EYRFSNQKLG DLGLEFTDMR TSLYETVISL QHRGHVPVIV PRHRACL

Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)

001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS

Arabidopsis Description

CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.